Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1098 ATGCTTCGTTCGTCCTCAAGCTCGTCCTCAAGCTCTCTGCTCTCTCTTGTGTCTCTCTGTGAGCTTCCAAGTGCCGAACAAGGAAAGTCTCTCTCTCAGCCTCTCTGCTTCTCTCTCTTGACATCGTTGAATACTGAAGCAACTGATTCAGTGGCCCTAAGGATGATGAAGATGAAGAAGGCAAGGAGGAACGTTAAGCTCTTAGCTTCCTCAACTTCTGGGTTTGCTTCCATTGCTCTTCTCCACCTTCAAGCAAGCAAGCAATTGGCTTCTTTCATGATGCCGAGTGCGATCCCAAACCTATCCGACAAAGACGCTGAACCCTTCATGGAATTCGACCCGACACGAAGGTACGGCAAATACTCGGAGCTACTAGGAGCCGGAGTAGTGAAAAAGGTATACAAAGCATTCGACAAGGAAGAAGGCATAGAGGTGGCATGGAACCAGGTGAAGCTCCGAAACTTCTCGGACGACCCAGTGATGGTGGATAGACTCTTCTCGGAGGTCCGATTACTCAGAAGTCTCGCCGACAAGAACATCATAGCCTTGTACAATGTTTGGAGGGACGAGGAGCGAGACACGCTGAACTTCATCATGGAGGTTTGTACCAGTGGGAATCTGAGTGAGTATAGGAAGAAGCACATTACTTAG 651 0.4885 MLRSSSSSSSSSLLSLVSLCELPSAEQGKSLSQPLCFSLLTSLNTEATDSVALRMMKMKKARRNVKLLASSTSGFASIALLHLQASKQLASFMMPSAIPNLSDKDAEPFMEFDPTRRYGKYSELLGAGVVKKVYKAFDKEEGIEVAWNQVKLRNFSDDPVMVDRLFSEVRLLRSLADKNIIALYNVWRDEERDTLNFIMEVCTSGNLSEYRKKHIT 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1098 216 Gene3D Phosphorylase Kinase; domain 1 103 200 - -
Glsi01g1098 216 SUPERFAMILY Protein kinase-like (PK-like) 119 213 IPR011009 -
Glsi01g1098 216 FunFam Probable serine/threonine-protein kinase WNK1 103 200 - -
Glsi01g1098 216 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 103 214 - -
Glsi01g1098 216 ProSiteProfiles Protein kinase domain profile. 119 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1098 216 Pfam Protein kinase domain 122 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1098 Glsi-ChrGlsi01 59909633 59914092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1098 103 214 MAP Kinase Kinase Kinase AT5G55560 74.107 1.84e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Glsi01g1098 Pkinase 6.2e-11 CL0016