Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1080 ATGGAAATCAACGTTATCTCAAGAGAAACCATCAATCCATCCTCACCCACTACAGATGAAAACAAGATCCTAAAGCTTTGTTTTTTTGATGTGTTTCAACTCAACAACTATTTTCCACTAATCCTGTTCTACCCAAACCCTAATAATGGCGTCCAAGAACCCACCCATATCCTCTCTGCTCAGTTGAAAAAATCTCTATCAGAGGCGCTAACCGTCTTCTACCCCCTAGCAGGCAGAAGATACGACCAATTCTCCATCATTTGCAACGATGAAGGTGCTCATTTTTTGGAAGCCATGGTGAATGCTTCCATGGCTGAGTTTCTGAAACCACCCAGATTAGAATTTCTTCACAAATTACTTCCGCCAGAGCCTAACAATATGCACCCACAACCACAAGCCTTGCCTCAGCTACTCATCCAAGTGAATATTTTCACTTGTGGTGGGGTAGCTCTTGGTTTGTGGAATCTCCACACCCTCTTGGACGCATGCTCTTGCAGCACCTTCTTGAAAACATGGGCTGCAATTTGCAGCCATGGGTCAAGGGAAGATAAAGAGATTTCATTATCACGGCCTGATTTTTCTTCTGCTTTCTCCTTCTTCCCTCCTAGAAATACCTCGGGTGTGCGTTCTGGTGTGTTGAACATCAACTCATCGGCCTCAAAGATAGAAGCAGAGTGCACTGTGAGAAGGTTCTTGTTCACTGCCAATGCCATTAATGGACTAAGAGGTGAAGCAAAAGACGATAATGATCATTACGAGAGCTCCAAAAATAACCCTACCCGTTATCAAGCACTGTCTTGTTTCATCTTCAAGCACATGAATATTGCCTGCAGAAAGAGATCAGCAGAAACCAGCATGCTTTCAGTGGTGCTGCATGTTGTGGACATGAGGAGGAGGATGGGTGAGCCTTTCACTGAAAACTCCATGGGAAACCTGCTGTGGCCAGCAGTGGTGCTCTATGACATGGTGGATGCAAACACTGATATCAAAGATTTGGTGAGAATTATGAGAGGGAAAATTGGGGATCTAACGGAGGAGTTGTTTCTGAAAGTTCGAAGTGATCTCAGTTTTCTTTGGAGCGATGAGTGTGCAGAGCTAATGCTTGAAGGAATAGAGGCAAAGAGGCCGATTACGTTTTTGTTCACTAGTTGGGGTGATATGGGTTTCAATGAGTTGGATTTTGGTTGGGGAATGCCTTTGTGGCTTGGTCATAGAGGGGATAATAGAAAAACAATTCCCAACACTGTTGTTCTCACAGAGACTAAGGAAGGAATAGAGGCATGGGTGACATTGGCAGAGCAATGCATGGCTATTCTGGACAAAGATTTGGACTTCCTTAGATTTGCTTTGCCTAATCCTATTGTTTCAAATATTTAG 1377 0.4379 MEINVISRETINPSSPTTDENKILKLCFFDVFQLNNYFPLILFYPNPNNGVQEPTHILSAQLKKSLSEALTVFYPLAGRRYDQFSIICNDEGAHFLEAMVNASMAEFLKPPRLEFLHKLLPPEPNNMHPQPQALPQLLIQVNIFTCGGVALGLWNLHTLLDACSCSTFLKTWAAICSHGSREDKEISLSRPDFSSAFSFFPPRNTSGVRSGVLNINSSASKIEAECTVRRFLFTANAINGLRGEAKDDNDHYESSKNNPTRYQALSCFIFKHMNIACRKRSAETSMLSVVLHVVDMRRRMGEPFTENSMGNLLWPAVVLYDMVDANTDIKDLVRIMRGKIGDLTEELFLKVRSDLSFLWSDECAELMLEGIEAKRPITFLFTSWGDMGFNELDFGWGMPLWLGHRGDNRKTIPNTVVLTETKEGIEAWVTLAEQCMAILDKDLDFLRFALPNPIVSNI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1080 458 Gene3D - 1 209 IPR023213 -
Glsi01g1080 458 Gene3D - 224 447 IPR023213 -
Glsi01g1080 458 PANTHER F21J9.9 4 449 - -
Glsi01g1080 458 Pfam Transferase family 1 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1080 Glsi-ChrGlsi01 59153976 59155352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1080 1 441 Monolignol Biosynthesis Gene Families AT5G48930 23.026 2.83e-17 82.0