Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1073 ATGTCTAAGACGAGCTCCAAGAATTTGTTGGCAGCCCTTTGGTTGCCCATTGTAGTTTTGAGCTTGTTCCATGTGATAGAGTGCCAAGAAGTGAATGACTACGACCAAGTTGACAACCCAGCTGTTCTTCCCCTGATCACGCAACTTGTGTATAGTCAGATTTCCAATTTGACATCAGTTCTCAGTCAGCAGATCAGCAGCCAGTCCAGTTTTTGCGTCAAAGATCCGGAAGCAGACTGGAACCAAGCCTTTAATTTTTCATCTGACTTGGACTTCTTGGCTTCTTGCATTCGGAAGACTAAAGGAGATATTACAAGACGCATATGTACAGCAGCTGAAATGAAGTTTTACTTAAATAGTTTCTTTGAGAGATCTACAAGTGCAAATTATCTAAAGCCTAACAAGAACTGCAATTTAACCTCATGGGTCTCTGGTTGTGAGCCAGGATGGGCCTGCAGTATTGGCGCAAGTCAGCAGATTGACCTTAAAAATTCACAGACGATACCTGCAAGAACTAGTAACTGTCAAGCCTGTTGTGAGGGCTTTTTCTGTCCTCATGGTATCACATGCATGATACCTTGCCCACTAGGTTCATATTGCCCTCTTGCAACACTAAATAAAACAACTGGTGTTTGTGAACCATATGTTTACCAATTACCCCCAATGCAGCCAAATCATACATGTGGAGGAGCAAATATTTGGACTGATTTTAGTAGTAGTAGTGAGATATTTTGTTCAGCTGGATCATATTGCCCAACAACCACCAGAAGAGTCCCCTGCAGTAGTGGACATTACTGCAGGATGGGTTCTACATCTGAGAAAAGATGCTTCAAGTTAAGCTCATGTAATTCAAACACAGCGACCCAAAATATGCATGCATATGGAGTTATGCTTATTGTTGCTTTGAGTACTTTGCTACTCATTATTTACAACTGTTCTGACCAAGTTCTCACTACTAGGGAAAGGAGAATGGCCAAATCCAGAGAAGCGGCAGCTAGAAATGCAAGGAAGACTGCCAATGCACGCCAAAGATGGAAAGCTGCAAAAGATGCTGCCAAGAAGCGTGTAAGTGGGCTGCAAGTTCAAATATCACGCACATTTTCTCGTAAGAAGGATGTAGAAAATCTGGAAAAAGTTAAAATTTTGAATCAAGCAACTTCTGAAACGGATGTTGAATTGTTGTCACCTCCACCTTCAATTACTTCAAGCATGGCTGTAACTTCATCTGCAATGCCAAATGCGAAGGGAAAGGAACCCAGTGACTTGATTCAGATGATGCATGAAATTGAAAATGACCCAGACATTAATGACAACTTTGATGTAGAAGTTAGTAACAAAAGTGTAACAGGAAATATGCCCAAGGGAAAACGACTTCATACTCATAGCCAAATTTTTAGTTATGCGTATGCTCAACTTGAAAAAGAGAAGGCTCAGCAAGAAGAAAACAAGAACCTTACCTTCTCAGGAGTTATTAGAATGGCTATCAACAGTGATCAAAGAAAAAGGCCTTTAATTGAGATTTCTTTCAAAGATCTCACCCTTACATTGAAAGAAAAAAACAAGCATATATTGAGATGTGTTACTGGGAAAATTAAACCTGGACGCATTACTGCAGTCATGGGTCCATCAGGTGCTGGCAAGACAACATTTCTTTCAGCTCTAGCTGGAAAGGCATTTGGATGCACTATGGTTGGCTCAATTCTTATAAATGGAAAAAATGAATCTATTCACTGCTATAAGAAAATTATTGGCTTTGTGCCACAAGATGATATTGTTCATGGAAACCTGACTGTAGAAGAAAACCTCTGGTTCAGTGCAAAGTGCAGACTATCTGCTGACTTGTCAAAACCAGACAAAGTTCTGGTTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAGACAGTGCGGAATTCCTTGGTTGGAACAGTAGAAAAGAGAGGGATATCTGGAGGCCAAAGGAAGCGTGTAAATGTTGGACTAGAGATGGTCATGGAGCCTTCACTTTTAATTTTGGATGAACCAACATCTGGTTTGGACAGTGCATCATCCCAGCTCCTTCTTAGAGCGCTGAGACGTGAAGCTCTTGAGGGGGTGAACATTTGCATGGTGGTTCACCAACCCAGCTATGCCTTATTCGAGGTGTTTGATGACTTGGTACTTCTGGCAAAAGGTGGTCTCACAGTCTATCATGGCTCAGTCAAGAAAGTTGAAGAATACTTTGCAGGCCTTGGGATTAAAGTCCCAGAGAAGATAAATCCTCCAGATTACTTCATTGACATTTTGGAGGGTATAGCAGTACCTAGTGGAAGCTCAGGAGTGAGTTGTAAAGAGCTGCCAGTTAGATGGATGCTTCACAATGGATACCCAGTACCACTTGATATGCAGCAGAATGCAGGAAAATTTGATTCCTCCCCTAGTGTAAATCCAGTAAATGGAATAGATCCTGATGGGTCTGGTTATGAGGAAAAATCCTTTGCTGGAGAATTATGGCAAGATGTGAAACACGATGTGGTGCTACAGGGGGAGAAGATACAACTTAATTTTTTAAAGTCCAAGGATTTATCTAACCGGACAACTCCTGGTGTGTTCAAGCAATACAAGTACTTTCTAAAAAGGGTTGGTAAGCAGCGATTGCGGGAAGCTAGGATCCAGGCAATAGATTATCTGATTTTATTACTTGCTGGAGCCTGCTTAGGAATACTTACTAAAGCCAGTGATCAAACGTTTGGTGCAGCTGGGTACACCTATACAGTGATTGCTGTCTCTCTTCTATGCAAAATAGCAGCCTTGAGATCATTTTCTCTGGATAAATTGCACTACTGGAGAGAAAGTGATTCTGGCATGAGTAGCTTGGCTTATTTCCTCTCTAAAGATACTATTGATCATTTCAATACAGTGATCAAGCCTCTGGTGTACCTGTCTATGTTCTATTTCTTCACCAATCCAAGATCTACTTTTGCAGACAATTACATTGTGCTGCTCTGTCTTGTATACTGTGTTACTGGTATAGCATATGCATTTGCCATATTCTTTGAACCCGGTGCAGCCCAGCTGTGGTCGGTGCTGCTCCCGGTTGTTTTGACACTCATTGCAACACAACCGAAAGATAGCAAATTTTTGAAGGATATAGATAATTTATGCTATTCTAAGTGGGCTTTACAAGCATTTGTAATCGCAAATGCTGAAAGGTATAACGGAGTATGGCTGATAACTCGTTGTGGTTCACTTCTGAAAAGTGGCTATAATCTTCATGACTGGAGTTTGTGCATATTCATCCTCATTCTCATGGGTGTAGCTAGTCGGGCTCTAGGATTTTTGTGTATGGTCACCTTCCAAAAGAAGTAA 3345 0.4123 MSKTSSKNLLAALWLPIVVLSLFHVIECQEVNDYDQVDNPAVLPLITQLVYSQISNLTSVLSQQISSQSSFCVKDPEADWNQAFNFSSDLDFLASCIRKTKGDITRRICTAAEMKFYLNSFFERSTSANYLKPNKNCNLTSWVSGCEPGWACSIGASQQIDLKNSQTIPARTSNCQACCEGFFCPHGITCMIPCPLGSYCPLATLNKTTGVCEPYVYQLPPMQPNHTCGGANIWTDFSSSSEIFCSAGSYCPTTTRRVPCSSGHYCRMGSTSEKRCFKLSSCNSNTATQNMHAYGVMLIVALSTLLLIIYNCSDQVLTTRERRMAKSREAAARNARKTANARQRWKAAKDAAKKRVSGLQVQISRTFSRKKDVENLEKVKILNQATSETDVELLSPPPSITSSMAVTSSAMPNAKGKEPSDLIQMMHEIENDPDINDNFDVEVSNKSVTGNMPKGKRLHTHSQIFSYAYAQLEKEKAQQEENKNLTFSGVIRMAINSDQRKRPLIEISFKDLTLTLKEKNKHILRCVTGKIKPGRITAVMGPSGAGKTTFLSALAGKAFGCTMVGSILINGKNESIHCYKKIIGFVPQDDIVHGNLTVEENLWFSAKCRLSADLSKPDKVLVVERVIEFLGLQTVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFEVFDDLVLLAKGGLTVYHGSVKKVEEYFAGLGIKVPEKINPPDYFIDILEGIAVPSGSSGVSCKELPVRWMLHNGYPVPLDMQQNAGKFDSSPSVNPVNGIDPDGSGYEEKSFAGELWQDVKHDVVLQGEKIQLNFLKSKDLSNRTTPGVFKQYKYFLKRVGKQRLREARIQAIDYLILLLAGACLGILTKASDQTFGAAGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPLVYLSMFYFFTNPRSTFADNYIVLLCLVYCVTGIAYAFAIFFEPGAAQLWSVLLPVVLTLIATQPKDSKFLKDIDNLCYSKWALQAFVIANAERYNGVWLITRCGSLLKSGYNLHDWSLCIFILILMGVASRALGFLCMVTFQKK 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1073 1114 SMART AAA_5 533 725 IPR003593 GO:0016887
Glsi01g1073 1114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 506 729 IPR027417 -
Glsi01g1073 1114 FunFam ABC transporter G family member 24 501 743 - -
Glsi01g1073 1114 Pfam ABC-2 type transporter 705 1114 IPR043926 GO:0140359
Glsi01g1073 1114 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 247 1101 - -
Glsi01g1073 1114 CDD ABCG_EPDR 505 731 - -
Glsi01g1073 1114 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 507 749 IPR003439 GO:0005524
Glsi01g1073 1114 Pfam ABC transporter 526 676 IPR003439 GO:0005524
Glsi01g1073 1114 ProSitePatterns ABC transporters family signature. 648 662 IPR017871 GO:0005524|GO:0016887
Glsi01g1073 1114 Gene3D - 494 749 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1073 Glsi-ChrGlsi01 58933529 58966897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1073 502 708 Calmodulin-binding Proteins AT2G36910 28.505 5.71e-14 75.1