Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1058 ATGGTTTCCAAAAATCAATCCATAGAAGAGAACCCAAAGCGACAATGGTCCTTGCGAGACTTTGAGATCGGAAAACCTCTTGGAAAAGGGAAATTTGGTCGAGTCTATGTCGCTAGAGAAGTCAAGAGCAAATATGTTGTGGCATTGAAGGTTATCTTTAAAGAACAAATAGTAAAGTACAGAATTCATCATCAACTGAGGAGAGAGATGGAGATACAGACCAGCCTTCAACACCCAAACATCCTTCGTCTCTATGGCTGGATGAAGGCTATCTGTCCTAGTAGTTGGAGAATAAACATTTATTCTTCTAGGCATCACTTTAAATTATCGAGTTTTGTGGAAACAGAGTCAGAACAGAAGGAAGCTATAGTCTGTTTTCGTAACTCTTTTCAGAGATTTTTCTTAGTTTCGAATAATGATATGTTTATGCTGATAGCAGCAAGCAAGCAATTATCAGGTCAGGCTGTTCTAGCAGATCTGGATATTAAGCCCGATAATTTGTTACTTGACCATGAGGGTCGTCTTAAAATTGCAGACTTTGGTTGGTCTGTACAGTCAAGAAGTAAGAGACACACCATGTGTGGGACATTGGATTATTTAGCACCAGAAATGGTAGAAAATAAAGCACATGATCAAGCAGTTGATAATTGGACTTTGGGTATCCTTTGTTATGAGTTCCTCTATGGTGTTCCCCCATTTGAGGCTGAGAGTCAAGCGGATACCTTCAAAAGGTAA 735 0.3946 MVSKNQSIEENPKRQWSLRDFEIGKPLGKGKFGRVYVAREVKSKYVVALKVIFKEQIVKYRIHHQLRREMEIQTSLQHPNILRLYGWMKAICPSSWRINIYSSRHHFKLSSFVETESEQKEAIVCFRNSFQRFFLVSNNDMFMLIAASKQLSGQAVLADLDIKPDNLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDQAVDNWTLGILCYEFLYGVPPFEAESQADTFKR 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1058 244 ProSiteProfiles Protein kinase domain profile. 21 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1058 244 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Glsi01g1058 244 Pfam Protein kinase domain 21 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1058 244 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 161 244 IPR030616 GO:0004672
Glsi01g1058 244 Gene3D Transferase(Phosphotransferase) domain 1 161 243 - -
Glsi01g1058 244 SUPERFAMILY Protein kinase-like (PK-like) 19 242 IPR011009 -
Glsi01g1058 244 PIRSF ILK 1 120 - -
Glsi01g1058 244 PIRSF ILK 149 244 - -
Glsi01g1058 244 FunFam Aurora kinase A 13 91 - -
Glsi01g1058 244 SMART serkin_6 21 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g1058 244 Gene3D Phosphorylase Kinase; domain 1 9 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1058 Glsi-ChrGlsi01 57188075 57190629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1058 18 244 CBL-interacting serine-threonine protein kinases AT5G45820 32.618 4.68e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Glsi01g1058 Pkinase 1.3e-39 CL0016