Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0997 ATGCTTAGGCTTCCATGCTTTTGTTGTGCACTAGGTTGCAAGCACAACATTGACCACCCAAGAGCAAGGCCTCTCAAGGATTTTAGAACCCTTCAAACACATTATAAGAAGAAGCATGGGATCAAACCCTACATGTGCAGAAAATATGGCAAAGCATTTACAGTGAAAAGTGATTGGAGAACTCATGAGAACTCATGGAACAACTTGTATAGCATCTTAAAAGAAAATTCAATTGATTCCACAATTTCTATCAGATCGGGGAGCTCGCCGCATGTCGAATTTCTTACAGCGAGCAGTGAGCAGCGAGCAACCAGCAACAGAGAGCAGGGGAAGACGATGGCTAGGGCATAA 351 0.4359 MLRLPCFCCALGCKHNIDHPRARPLKDFRTLQTHYKKKHGIKPYMCRKYGKAFTVKSDWRTHENSWNNLYSILKENSIDSTISIRSGSSPHVEFLTASSEQRATSNREQGKTMARA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0997 116 Gene3D Classic Zinc Finger 5 91 - -
Glsi01g0997 116 MobiDBLite consensus disorder prediction 93 116 - -
Glsi01g0997 116 PANTHER ZINC FINGER PROTEIN WIP2 1 65 IPR043584 GO:0003700|GO:0010468
Glsi01g0997 116 SUPERFAMILY beta-beta-alpha zinc fingers 29 64 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0997 Glsi-ChrGlsi01 45183804 45184954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0997 1 70 C2H2 Transcription Factor Family AT3G57670 75.714 3.48e-36 125