Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0989 ATGGCTTTCCCCATAATAGCTTTCCTTTTATTCCTTTCCCTTCCTTTCTCATCAGAAGGTAAAGGACATCATCTGAGCCTTGACTATTACAAGCAAAAATGCCCCGACTTTGAAAGAATTGTAAGAGAAAATGTTTACACCAAGCAAATCTCCATCCCCGCTACTGCTCCAGGCGTCCTCCGCCTCTTTTTCCACGACTGCATCACCGATGGCTGCGATGCTTCCATCCTTATTAACTCCAATGGTTACGTCAAGGGCGAGCGTGACGCAGAGATCAACCTCTCCCTCTCTGGGGATGCCTTTGACCTCATCAACAAGATCAAGAATACCTTGGAGCTGACATGCCCAGGTGTTGTTTCCTGCTCAGACATCATCGCACAAACCACCAGAGACCTTGTGAAAATGGTGGGGGGTCCATATTATCGAGTGCCTCTTGGACGAAAGGATAGCTTTAAATCAAATATTTCCAAGCCAGAGGAAAGCCTTCCCAAGACAACCATGAGCATGGATCAGATAATTCCGAAGTTCACATCAAAGGGTTTCACCGTGAAGGAGATGGTAGCCCTAACTGGTGCACACACTATTGGATTCACGCACTGCAAGGAGTTCAGCGATAGAATCTTCAACTTCAGCTCAACCTCACCAGTTGATCCAACCCTTAACCCAAATCTGGCTGCAGGTTTGAGGCACCTCTGTCAGAACTACACTAACGACCCTTCAATGTCAGCCTTCAACGATATGAGGTCACCAAGCAAATTTGACAATGCCTACTTTCAGAACGTGTTGAATGGGTTGGGCCTCTTGACCTCTGATTACCTTCTGAGTGTGGACCCCAGAACAAGGCCAATAGTGGAGCTCTATGCAAGTAATCAGAATGCGTTTTTCCAGGATTTTGCAAAGGCAATGGAGAAGCTTAACACGTATGGAGTGAAGACTGGTAGAAGAGGAGAGGTGAGGCTCAGGTGCGACCAATTCAACCATCTTCCCGCGTAG 993 0.4713 MAFPIIAFLLFLSLPFSSEGKGHHLSLDYYKQKCPDFERIVRENVYTKQISIPATAPGVLRLFFHDCITDGCDASILINSNGYVKGERDAEINLSLSGDAFDLINKIKNTLELTCPGVVSCSDIIAQTTRDLVKMVGGPYYRVPLGRKDSFKSNISKPEESLPKTTMSMDQIIPKFTSKGFTVKEMVALTGAHTIGFTHCKEFSDRIFNFSSTSPVDPTLNPNLAAGLRHLCQNYTNDPSMSAFNDMRSPSKFDNAYFQNVLNGLGLLTSDYLLSVDPRTRPIVELYASNQNAFFQDFAKAMEKLNTYGVKTGRRGEVRLRCDQFNHLPA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0989 330 FunFam Peroxidase 163 305 - -
Glsi01g0989 330 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 SUPERFAMILY Heme-dependent peroxidases 25 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Glsi01g0989 330 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Glsi01g0989 330 Pfam Peroxidase 53 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PANTHER - 6 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi01g0989 330 Gene3D - 28 326 - -
Glsi01g0989 330 FunFam Peroxidase 28 172 - -
Glsi01g0989 330 Gene3D Peroxidase, domain 2 163 305 - -
Glsi01g0989 330 CDD secretory_peroxidase 24 325 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0989 Glsi-ChrGlsi01 43091646 43092638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0989 5 328 Peroxidase AT5G47000 55.247 3.27e-130 373