Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0971 ATGTTGAGGATTTCAAATCCATTACTGATGCTAGGAAAATCTGCCTGCAAACACTGGGAACTTGATTTGGAAAAGATGGTTCTCAAGGAAAGAAGAAAGTTTGAAGGAAGTACTGAAATAGTTTCAACAATTAGGCAATTCCAGTCATGGCAAGGTTTTGATAATAGTATTGCCTATTGGAGAAAGTTTTTTGTTCAATATTATTCTCCTCATGCAAAGAAAAGGTTGTGTTTATCATTGTATGATAACGTTGGACAACATGCACTTTGTGTTTTCCCTCAAGCATCTATGGATGCATGGCAGTGCGACATATGTGGTTCTAAATTTGGAATGGGATTTGAATCAACTTTTAAAATACTCCCTAGACTTAACGAAATCAAATTTGGCAGTGGAGTGATCGATGAACTTCTGTTTCTGGACTTGCCACATGAATATAGATTTTCGTCTGGTGTAATGATGTTAGAATATGGAAAACCAGTTCAAGAAATCGTATATGAGCAGCTTCGTGTTGTTCGTGATGGTCACCTTCGCATCATATTCACACAAGATCTGAAGTTCTTATCCAGATATTATCTTGGGAATTTTGTGCAAGGCACCATGAAGAACTTCTTCTCCGAAGATTGGTTGCACCGCAGGTATAATTCTGCATGCTTTTGA 657 0.3744 MLRISNPLLMLGKSACKHWELDLEKMVLKERRKFEGSTEIVSTIRQFQSWQGFDNSIAYWRKFFVQYYSPHAKKRLCLSLYDNVGQHALCVFPQASMDAWQCDICGSKFGMGFESTFKILPRLNEIKFGSGVIDELLFLDLPHEYRFSSGVMMLEYGKPVQEIVYEQLRVVRDGHLRIIFTQDLKFLSRYYLGNFVQGTMKNFFSEDWLHRRYNSACF 218
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0971 218 PANTHER LIM DOMAIN-BINDING PROTEIN 52 188 IPR029005 -
Glsi01g0971 218 Pfam LIM-domain binding protein 43 186 IPR029005 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi01g0971 Glsi-ChrGlsi01 38412816 38414249 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0971 54 188 C2H2 Transcription Factor Family AT1G43850 53.333 1.41e-45 159