Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0963 ATGTCAAACCACCAAGACGATCTCGATCTACTTCTTTCCCTTCATGACAGGGTTCTGGAAACTCCTCCCAGTTCTCCTTCATCCCGTTCACCAGTTAGATTATTGCTGCGGCATAGGCCTGTTTTGAGAGATCGTTTATTTACGGAACCTAGGAAGGCAATGATGTCAAGGTACGAGTTGAGGAGAATTAGGGAGTTGATATTCTGTGTAGAACTGCAAGCTGAGGTATATCTTTATGACTATGCTAGTCTAGATGGTACTGATATTCTTACGCTGATTTTGGCTAACACAATTGTAGCTGTTGCAAATGGACTACAAGCTTGGAAAGTCCTTGAAGACCTGACTGCTAATATTGATCTTGTTTTGACTGAGGTAGTCTTGCCGTGTTTAACGGGCATTGGTCTCCTATCGAAGATTATGAGCCACAAAACTTGCAAAAATATTCCTGTCATTATGATGTCATCTCATGATTCCATGAGTGTAGTATTTAAGTGTTTGTCCAAGGGTGCAGTTGACTTTTTAGTCAAGCCTATACGAAAGAATGAGCTAAAAAACCTTTGGCAGCATGTTTGGAGGAAATTCCTTAGCTCTAGTGGTAGTGGAAGTGAAAGTGGTGTGCGCACTCAAAAGTCTTTGAAGTCAGAAAGTGGGGAGCATTCAGACAACAAGCGTGGCAACTATGATGAAGATGATATTGGAAGCATTGGCTTGAATGCTAGAGATAGAAGTGATAATGGAAGTGGCACCCAGATGGCACTAAATGAAGATTTACCTTTTAGTCTTGTAGTGGAGAAATGTGGACCTCAGCCTCGTAAGGTGATCTTCTACAGCTCCATCTCTAAGGACAGTCATATGATCTTCCAAGGTTGA 870 0.4184 MSNHQDDLDLLLSLHDRVLETPPSSPSSRSPVRLLLRHRPVLRDRLFTEPRKAMMSRYELRRIRELIFCVELQAEVYLYDYASLDGTDILTLILANTIVAVANGLQAWKVLEDLTANIDLVLTEVVLPCLTGIGLLSKIMSHKTCKNIPVIMMSSHDSMSVVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRKFLSSSGSGSESGVRTQKSLKSESGEHSDNKRGNYDEDDIGSIGLNARDRSDNGSGTQMALNEDLPFSLVVEKCGPQPRKVIFYSSISKDSHMIFQG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0963 289 SMART REC_2 65 187 IPR001789 GO:0000160
Glsi01g0963 289 SUPERFAMILY CheY-like 97 194 IPR011006 -
Glsi01g0963 289 Pfam Response regulator receiver domain 96 185 IPR001789 GO:0000160
Glsi01g0963 289 MobiDBLite consensus disorder prediction 212 237 - -
Glsi01g0963 289 PANTHER TWO-COMPONENT RESPONSE REGULATOR 98 216 IPR045279 GO:0009736
Glsi01g0963 289 ProSiteProfiles Response regulatory domain profile. 73 191 IPR001789 GO:0000160
Glsi01g0963 289 MobiDBLite consensus disorder prediction 197 211 - -
Glsi01g0963 289 Gene3D - 88 240 - -
Glsi01g0963 289 MobiDBLite consensus disorder prediction 197 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0963 Glsi-ChrGlsi01 36132926 36150150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0963 89 250 Response Regulator Gene Family AT5G60100 63.905 2.04e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi01g0963 Response_reg 7.2e-17 CL0304