Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0954 ATGTTTTCAAGACTGACACATACTCACGAAGGGACGGTTGAGCAGGAAGATATGCAGGCTGGGTTAAACAACAGTCACCTGGGAGACCCGTGTCTAGTATTGACTGCTGATCCCAAACCTCGTCTTCGTTGGACTGCTGACCTTCACGAACGATTTATTGATGCTGTCACTCAGCTTGGGGGTGCCAGTAAAGCTACACCCAAAGCAATTATGAGGACCATGAATGTCAAGGGTTTGACACTCTATCATTTAAAGAGTCATCTTCAGAAATACAGACTTGGTAAACAATCAGGAAAAGATACTGAAGAGGGCTGCAAAGATGGAATATCAGCTTCATATCTTTTAGAAAACCCTGGTGACTCTGCTCCAAAGATGCCAACTTCTGATGCTAATGAGGGTCATGAAGTCAAGGAGGCATTAAGAGCACAGATGGAAGTGCAAAGTAAACTGCATTTCCTAGTGGAGGCAGAGAAGCACTTGCTGATTCGCCAAGATGCAGAGCGGAGATATATGGCCATGCTTGAGAGAGCTTGTAAGATGTTGGCTGATCAATTTATTGGTGCTACAGTTATAGACACAGAGAACCAAAAATTTCAAGGACTGGGAAGTAAAGCATCAAGAAGTTCTATGCTTGATCCCCTGAGCTTCTGTTCCCTACCATCTGCTGAGCTGGCTGGAGTGCATGTTTCAGAAGAAGTACAGCCTAGTTTCCTGCCCCTGAGGGTTGACTGTTCAACTGAAAGTTGCCTAACATCACTGGAGAGTCTTGGAGGATTGACTCTAGAAGGATCTCCAGGTGGGGCAAAAAAGAGGATGCTAAACTTGGACTCAATGGTGGCTCCTTTGATCTGGAGTGAAGCCAACATGAGAACACAAGGTTTGGCTGAAGTTAATCCTCATGGAATAACTAGGTATGGCATGTAG 924 0.4502 MFSRLTHTHEGTVEQEDMQAGLNNSHLGDPCLVLTADPKPRLRWTADLHERFIDAVTQLGGASKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQSGKDTEEGCKDGISASYLLENPGDSAPKMPTSDANEGHEVKEALRAQMEVQSKLHFLVEAEKHLLIRQDAERRYMAMLERACKMLADQFIGATVIDTENQKFQGLGSKASRSSMLDPLSFCSLPSAELAGVHVSEEVQPSFLPLRVDCSTESCLTSLESLGGLTLEGSPGGAKKRMLNLDSMVAPLIWSEANMRTQGLAEVNPHGITRYGM 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0954 307 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Glsi01g0954 307 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Glsi01g0954 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Glsi01g0954 307 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Glsi01g0954 307 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 255 IPR044848 GO:0003700
Glsi01g0954 307 FunFam Myb family transcription factor 38 96 - -
Glsi01g0954 307 Pfam MYB-CC type transfactor, LHEQLE motif 135 180 IPR025756 -
Glsi01g0954 307 Gene3D - 38 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0954 Glsi-ChrGlsi01 33730949 33750632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0954 17 253 G2-like Transcription Factor Family AT3G24120 44.800 7.61e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi01g0954 Myb_DNA-binding 9.4e-07 CL0123