Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0911 ATGATCGCAAATACAGACCCTGACCCTGCCACTGCGGCCTCCACAGCCTCCGCGTCTTTCAATGCCTTAGATTCATCCCACTCTGACTTCACTCCGCCTTTCGATGATGCCGATCAGCCCACACCCCCACCAGCACCAAACATTGTGATGTCCTCCAGGGACCCCGATTCTCTCTTCAGCGGTGGTGGCATCAGCTTTCTCTCGGGAAGTCGAAATGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGATCTTCAATGGAGGATTTCTGTGAGACAAGGATATCGGAGGTTGATGGTCAGATGGTTGCCTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCTCGGACTGCAGAATACCTGAAAAATAATCTCTTTAAGAATTTAAGCAGCCATCCTGACTTTATCAAAGACACGAAGACAGCTATTGTTGAAGCATTTAAGCAGACAGATGTTGATTACCTTAATGAGGAAAAGGGTTATCAAAGTGATGCTGGGTCCACTGCATCAACAGCTGTGTTGTTGGGGGACCGAATTCTTGTTGCTAATGTTGGTGATTCCAGAGTAGTTGCTTGTAGAGCTGGTTCAGCTGTCCCTTTGTCTATTGATCACAAACCTGATAGATCTGACGAACGTCAAAGGATTGAACAGGCTGGGGGATTCATCATTTGGGCTGGGACATGGCGGGTTGGTGGTGTTCTTGCTGTCTCCCGTGCATTTGGTGATAAACTTCTTAAGCCATATGTTGTTGCTGACCCAGAAATTCAGGAAGAAGAGATTAATGGTGTAGATTTTATAATAATTGCTAGTGATGGACTTTGGAATGTCATATCAAACAAGGAAGTTGTGTCTTTAGTGCAAAACATCACAGATGCAGAAGTGGCATCAAGAGAACTTATTAAAGAAGCTTACACACGAGGAAGCTCTGACAACATTACTTGTGTTGTAGTTCGATTTGATCTATCTTGA 975 0.4441 MIANTDPDPATAASTASASFNALDSSHSDFTPPFDDADQPTPPPAPNIVMSSRDPDSLFSGGGISFLSGSRNGRFSYGYSSFKGKRSSMEDFCETRISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGYQSDAGSTASTAVLLGDRILVANVGDSRVVACRAGSAVPLSIDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEINGVDFIIIASDGLWNVISNKEVVSLVQNITDAEVASRELIKEAYTRGSSDNITCVVVRFDLS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0911 324 CDD PP2Cc 75 321 IPR001932 -
Glsi01g0911 324 Gene3D - 69 323 IPR036457 -
Glsi01g0911 324 Pfam Protein phosphatase 2C 77 314 IPR001932 -
Glsi01g0911 324 SUPERFAMILY PP2C-like 69 322 IPR036457 -
Glsi01g0911 324 ProSiteProfiles PPM-type phosphatase domain profile. 76 321 IPR001932 -
Glsi01g0911 324 ProSitePatterns PPM-type phosphatase domain signature. 107 115 IPR000222 GO:0043169
Glsi01g0911 324 MobiDBLite consensus disorder prediction 23 46 - -
Glsi01g0911 324 FunFam probable protein phosphatase 2C 59 68 324 - -
Glsi01g0911 324 PANTHER PROTEIN PHOSPHATASE 51 321 IPR015655 GO:0004722|GO:0006470
Glsi01g0911 324 SMART PP2C_4 65 319 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0911 Glsi-ChrGlsi01 23221329 23271439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0911 48 324 PP2C-type Phosphatase Gene Family AT1G43900 74.368 5.04e-156 439