Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0902 ATGGAAATAACCTACGCATCGCCCAGTTGTACCGACCTCGCCGCCGATTCCACCTCCATGCTAGCGCCGGCGACGACTACCCGTCCTGTCAGGGTCATCCCTCTGCAGCACCCCACCATTATCACGTCGTCGTCACCGCCTTATCTCAGTTTAATGTTCTCCAGGTTGGCCATGAAGCTCCGACGAATGACTTGGGTCGAATGGATCGAGCTATTCCTCCCTTGCTGCCGTTGGATTCGGTACTATAAATGGCGCGAGTATTTTCAGGTGGATCTCATGGCGGGAATCACAGTCGGTGTAATGCTTGTTCCCCAGGCAATGTCATATGCAAAATTAGGTGGACTTCAACCAATATATGGACTTTACTCCGGTTTTGTGCCCATATTTGTATATGCTATATTTGGGTCATCTCGTCAGCTTGCAGTTGGTCCAGTAGCACTGGTTTCTCTCTTGGTCTCTAATGTGCTAAGTAGCATTGCTGATTCATCCAGTGAATTATACACAGAGTTGGCAATATTATTGGCTCTTATGGTTGGGATACTAGAGTGCATAATGGGACTCTTAAGGCTTGGATGGCTGATTCGTTTCATAAACCATTCAGTGATTTCTGGCTTTACCACTGCTTCAGCTATTGTGATTGGTTTATCTCAGGCAAAGTACTTCTTGGGTTATAATATAGACAGAAGTAGCAAGATTGTCCCGTTGGTTAAAAGTATAATAGCTGGATTAGATAAGTTTTCGTGGCCCCCTTTTGTGATGGGATCAGTGATGCTAACAATACTACTAGTCATGAAGCATCTGGGAAAATCACGGAAGTACTTGCGTTTCTTGAGAGCCTCAGGTCCTCTCACAGCAGTAATTCTGGGAACAGCTTTTGTAAAAATATTCCATCCATCGGCCATTTCTTTGGTGGGAGATGTACCTCAGGGTCTGCCAAAATTTTCTGTTCCCAAAGCTTTTGGGCATGCAAAGTCCTTAATTCCAACTGCATTTCTAATCACTGGTGTTGCGATATTGGAGTCTGTGGGGATTGCCAAAGCTTTAGCAGCAAAAAATGGGTATGAATTGGATTCAAATCAAGAGTTGTTCGGTCTAGGTGTTGCCAATGTTCTTGGTTCATTCTTTTCAGCATACCCCACCACAGGATCCTTTTCAAGGTCAGCTGTCAATAATGAAAGTGGGGCAAAATCTGGAATAGCTGGGATTGTTACAGGAATCGTAATGACATGTGCACTTTTGTTCCTGACTCCATTATTTAAGTACATACCTCAGTGTGCTCTTGCTGCTATTGTGATCTCTGCTGTAATTGGTCTGGTGGATTATGATGAGGCCATTTTCTTATGGCGTGTGGATAAGAAAGATTTTCTTCTTTGGACCATTACTAGCACTACAACATTGTTCCTTGGTATCGAGATTGGTGTACTTGTAGGGGTTGGTGCTTCGCTTGCTTTTGTCATTCATGAGTCTGCGAATCCACATATTGCTGTTTTGGGTCGATTGCCAGGGACAACTGTTTATAGAAATACTAAACAATATCCTGAAGCATATACATACAATGGAATTGTAATTGTTCGCATTGATGCTCCCATTTATTTTGCAAACATAAGTTACATAAAGGACAGGTTGCGGGAATATGAAGCTGATGTTGATAATTCTACAAGGCGTGGACCTGGGGTTGAAAGTGTGTATTTTGTGATTCTAGAATTGGCACCTGTGACCTATATAGACTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGGCATCCAGATTGCCATATCCAATCCAAACCCAGAAGTTTTGCTTACCCTGTCCAGATCTGATTTAGTGGAGCTAATAGGCAAAGAATGGTACTTTGTAAGAATACATGATGCTGTTCAAGTTTGCCTGCAGCATGTTAAACACTTAAAAGAGATTCCCAGGACTCCACAAGCTTCGCCCTCTTTACCAGAAGATAAACCAAGTTTATTTGAGAGGTTACTAAAACAGAGAGGGGAGAACCTGTCAATTACCGACTTGGAGTGTGGCAAGGGCAAACCTCCGCTTTCCAAGGACAGAGATTCCCAATTGGAGCCACTGTTGTCAAAAAAATCTTGA 2115 0.4322 MEITYASPSCTDLAADSTSMLAPATTTRPVRVIPLQHPTIITSSSPPYLSLMFSRLAMKLRRMTWVEWIELFLPCCRWIRYYKWREYFQVDLMAGITVGVMLVPQAMSYAKLGGLQPIYGLYSGFVPIFVYAIFGSSRQLAVGPVALVSLLVSNVLSSIADSSSELYTELAILLALMVGILECIMGLLRLGWLIRFINHSVISGFTTASAIVIGLSQAKYFLGYNIDRSSKIVPLVKSIIAGLDKFSWPPFVMGSVMLTILLVMKHLGKSRKYLRFLRASGPLTAVILGTAFVKIFHPSAISLVGDVPQGLPKFSVPKAFGHAKSLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANVLGSFFSAYPTTGSFSRSAVNNESGAKSGIAGIVTGIVMTCALLFLTPLFKYIPQCALAAIVISAVIGLVDYDEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVLVGVGASLAFVIHESANPHIAVLGRLPGTTVYRNTKQYPEAYTYNGIVIVRIDAPIYFANISYIKDRLREYEADVDNSTRRGPGVESVYFVILELAPVTYIDSSAVQALKDLYQEYKLRGIQIAISNPNPEVLLTLSRSDLVELIGKEWYFVRIHDAVQVCLQHVKHLKEIPRTPQASPSLPEDKPSLFERLLKQRGENLSITDLECGKGKPPLSKDRDSQLEPLLSKKS 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0902 704 FunFam Sulfate transporter 31 491 638 - -
Glsi01g0902 704 ProSitePatterns SLC26A transporters signature. 117 138 IPR018045 GO:0008271|GO:0008272
Glsi01g0902 704 NCBIfam sulfate permease 74 631 IPR001902 GO:0016020|GO:0055085
Glsi01g0902 704 Pfam Sulfate permease family 88 461 IPR011547 GO:0016020
Glsi01g0902 704 MobiDBLite consensus disorder prediction 677 704 - -
Glsi01g0902 704 SUPERFAMILY SpoIIaa-like 513 635 IPR036513 -
Glsi01g0902 704 ProSiteProfiles STAS domain profile. 511 635 IPR002645 -
Glsi01g0902 704 PANTHER SULFATE TRANSPORTER 54 638 IPR001902 GO:0016020|GO:0055085
Glsi01g0902 704 MobiDBLite consensus disorder prediction 684 704 - -
Glsi01g0902 704 CDD STAS_SulP_like_sulfate_transporter 512 628 - -
Glsi01g0902 704 Gene3D STAS domain 491 639 IPR036513 -
Glsi01g0902 704 Pfam STAS domain 512 631 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0902 Glsi-ChrGlsi01 21776206 21821841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0902 3 640 Inorganic Solute Cotransporters AT5G13550 74.498 0.0 969