Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0896 ATGCGTGTTTTCCCGCGGGGGCAGGAGACAAGCGGCCTGAGGAGGAACGCGAGAACGAGAGTTGGTCGTTCAATAATATGGACTCCATGGGTACTCCGACGGCACTTTGAAAGACAAGGCATAAGAGGTCCACCCTACCGTCCGATCAGCGGGAACACGGCAGATGTTCTCAGCATGTACGCCGAAGCTCAATCAAAGCCAATGCCTTTATGCCACGACATCGTTCACCGCGTGGCTCCATTCTATCACAGGTGGTCTGCCATGTATGGGAAAACTTTTCTAATCTGGCACGGATCTACACCCAGGTTGGTCACATCCGACCCAGAGTTGATTAAAGAGGGTTTTTTTTTTAGTGCGGGTGGATCATTGGAGAGGGCTGACTTAAATCCAGTCGCAAAGCTGTTCTTTGGACAAGGATTAATTGCATTAAAGGGTGAGAAATGGGCTACTCACAGAAGAATAGCCAACCAGGCTTTTAAAATGGAGCGAGTTAAGTGCTGGATTCCAGATATTGAAGACAGCACCACAAAAATGTTTGACAAGTGGGAAGACGAGAGAAAAGGAGTGGACGAATTTGAAATAGAAGCAAGTAGAGACATCCAGAATCTTTCTGCTGATATTATATCGAGAGTTGCTTTTGGAAGCAATTTTGAAGAAGGGAAAGAAGTTTTCAAGTTACAAGAACAACAATATCATCTTTTCTCCCTTGCCAGCAGAAGTGTTTATATTCCTGGGTTCAGGTTTTTGCCTACTAAGAAGAACAGAGAAAGAAAGAGATTAGAAAAGGAAACCCGAGAATCAGTACGAGTGCTAATTGAGACAAGCAATAAAGCACAAGGATCAGATAATTTGCTTTCCTTGCTGATGTATTCCCACACCTGTCTCAGTAGTGAGAAAGAAAGGTTGGGGTTGGAGGAGATTATCGACGAGTGCAAAAATTTCTACTTTGCTGGAAAGGAAACAACTGCAAATGCAATAACATGGGCACTCCTACTTCTAGGAAAGCATCAAGAATGGCAAAGCAAGGCACGCGAGGAAGTACTTGGTGTTTTAGGACCCACTAAGCCTCCAACTTTAGAAACTTTAAATGACCGCAAAACTATCAGCTTGATACTTCAAGAAACACTAAGACTGTATCCTTTGTCGGGGGCATTATTGAAGCAAGCAAGCAAAAGGGTTAAGATTGGGAACATTGATGTTCCGGCTGGTACACAATTCTACGTGGCCTTGATTGCAGTTCATCATGATTCTGAGTTATGGGGAGAATCTGCTCATGAATTCGACCCTATGAGATTCACTCAACCTCGAAAGCATTCCTGTTCTTATTTTCCCTTTGGATTAGGCCCTAACTTTTGTGTGGGTCAAAACCTGGCTTTGATCGAAATGAAGGTTGTTCTTCCCATGATCTTACAACGATATTCTTTTGTTGTATCTCCAACATATGCCCATGCACCAATGTTGTTGATGGGCATGTCACCTCAATATGGTGTGCAACTTGTCTTTAGGAGATTATCCAAATGA 1521 0.4352 MRVFPRGQETSGLRRNARTRVGRSIIWTPWVLRRHFERQGIRGPPYRPISGNTADVLSMYAEAQSKPMPLCHDIVHRVAPFYHRWSAMYGKTFLIWHGSTPRLVTSDPELIKEGFFFSAGGSLERADLNPVAKLFFGQGLIALKGEKWATHRRIANQAFKMERVKCWIPDIEDSTTKMFDKWEDERKGVDEFEIEASRDIQNLSADIISRVAFGSNFEEGKEVFKLQEQQYHLFSLASRSVYIPGFRFLPTKKNRERKRLEKETRESVRVLIETSNKAQGSDNLLSLLMYSHTCLSSEKERLGLEEIIDECKNFYFAGKETTANAITWALLLLGKHQEWQSKAREEVLGVLGPTKPPTLETLNDRKTISLILQETLRLYPLSGALLKQASKRVKIGNIDVPAGTQFYVALIAVHHDSELWGESAHEFDPMRFTQPRKHSCSYFPFGLGPNFCVGQNLALIEMKVVLPMILQRYSFVVSPTYAHAPMLLMGMSPQYGVQLVFRRLSK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0896 506 Pfam Cytochrome P450 81 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0896 506 SUPERFAMILY Cytochrome P450 43 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0896 506 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0896 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0896 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0896 506 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0896 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0896 506 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0896 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0896 506 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0896 506 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0896 506 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi01g0896 506 PANTHER CYTOCHROME P450 FAMILY MEMBER 26 496 - -
Glsi01g0896 506 Gene3D Cytochrome P450 30 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0896 Glsi-ChrGlsi01 20843396 20849953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0896 24 505 Cytochrome P450 AT1G75130 52.469 0.0 533