Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0892 ATGCCGATCTATAGAATTGCTGTTGGGTGTCCTGGAGAGGCCAGCCAGCCCGATGCAATTAGAGCTGCATTTGCTGAGTTCTTCTCCATGCTCATTTTTGTTTTTGCTGGGCAAGGTTCTGGCATGGCGTACGGGAAGCTCACTAATAATGGATCTGCAACGCCAGCGGGTCTCATGGCTGCATCGTTAGCTCATGCATTTGGGCTTTTCGTGGCAGTTTCTGTTGGGGCAAACATTTCGGGTGGTCATGTGAATCCTGCAGTCACATTTGGTGCCTTCTTAGGAGGGAACATAACCCTGTTGAGAAGTATTTCGTATTGGATTGCGCAGTTGCTCGGTTCCACTGTTGCTTGCATGCTTCTCAAGTTCGCTACTGGCACGGAAACATCAGCTTTTGCTCTATCCGCTGGTGTGTCTGTTTGGAATGCTCTTATTTTCGAGATTGTGATGACGTTTGGCTTGGTATATACAGTTTATGCCACAGCAGTAGACCCTAAGAAAGGGAATGTGGGTGTTATTTCCCCACTTGCAATTGGTTTCATAGTGGGTGCCAATATCTTAGTTGGGGGAGCTTTTGACGGTGCATCCATGAACCCAGCTGTGTGCTTTGGCCCTGCCGTGGTTAGCTGGTCATGGACTCATCACTGGATCTATTGGCTTGGTCCATTCACTGGTGCAGCAATTGCAGCCATTGTCTACGATAATATCTTCATTGGTGAAGATGGTCACGAACCCGTTTCCAACAGTGACTTTTAG 756 0.4802 MPIYRIAVGCPGEASQPDAIRAAFAEFFSMLIFVFAGQGSGMAYGKLTNNGSATPAGLMAASLAHAFGLFVAVSVGANISGGHVNPAVTFGAFLGGNITLLRSISYWIAQLLGSTVACMLLKFATGTETSAFALSAGVSVWNALIFEIVMTFGLVYTVYATAVDPKKGNVGVISPLAIGFIVGANILVGGAFDGASMNPAVCFGPAVVSWSWTHHWIYWLGPFTGAAIAAIVYDNIFIGEDGHEPVSNSDF 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0892 251 Gene3D Glycerol uptake facilitator protein. 5 251 IPR023271 -
Glsi01g0892 251 FunFam Probable aquaporin TIP1-1 4 250 - -
Glsi01g0892 251 SUPERFAMILY Aquaporin-like 16 239 IPR023271 -
Glsi01g0892 251 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi01g0892 251 Pfam Major intrinsic protein 14 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi01g0892 251 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi01g0892 251 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi01g0892 251 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi01g0892 251 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi01g0892 251 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi01g0892 251 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi01g0892 251 PANTHER AQUAPORIN-8 6 244 IPR034294 -
Glsi01g0892 251 ProSitePatterns MIP family signature. 83 91 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0892 Glsi-ChrGlsi01 20435109 20436649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0892 1 251 Major Intrinsic Protein MIP AT4G01470 81.349 2.65e-149 415