Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0867 ATGTTAGCTGATTTTGGCCTTGCACATGCTTCAAAAGTTGGTTCTATATGCTTAGAAGCTATAAACACTGATATCTGGGGAACTCCAGGTCCTTCATCTATGTTTCAAAAATTCAACTACAGGGAGATAAAGAAGGCGACAGTAGATTTCAGCACCATCATTGGGCAAGGGGGATTTGGAACAGTGTATAAAGCTCACTTTAGTGATGGCCTAGTGGCAGTAGTAAAGCGAATGAACAAAGTGTCAAAGCAGGGGGAGGATGAGTTTTGTAGAGAAATAGAGCTTCTTGCTAGGTTGCATCATCAGCATCTTGTTTCTTTAAGAGGATTTTGTGGTAGAACACCTCTAAGTTGGCGAACTAGAATCCAAATTTCCATTGATGTGGCTAATGCACTGATAGTTGGGACAACCATATACCGTTGTGAGGACACATTTCTTGTTCTCCTTCTTATACGGAATGATATCTGGAGGCTTGGGTTTGTCAAGTTCCATCCTTGTGCTATACTTTTGTCTGTGAAGCAACTGCTACTCAATGACCCCATGACCAAAGAGATCCTTTGCTATGCTGCCCAGAATACTAAACTTGGATACTATTGCGACAGATTTTCGGGACTCAGGGTAAGGTTTCCTGTTTTCAAGAGATCTGTCATCCAGCGATTCTTTGACTCCCCCCTTAAGTCTTCTGTTCACCTCTGGGTTATCTATGGGGCAGAGCTTTCTTTATCATTTAGAGAGACACTAGGGAAAGAGAAAATTCCTTACGACGATGAAACTCTTAGTGATGTCTTATTCTAACGAGTCAAGAAATGCTACAAGAAGCTCTCAAATAGAGTTTCTTCTTCTTCTTCTTCTTGTGTTGAAGATTATGTTTTGTTGTCACATAAAGAGATTAGTGCATTGAATGTTAGCTTCATCTGTAAGCTCTCAAATGGAGTTCCTCCTCCTCCTCCTCCTCCTTCACATAAACAGATTAATGCATTTAATAATAAATATAAACATATTATCAAGGAGAGTGTGGGTGACACTTCTAAGACACAAGTTGATGAAGATGGAGATATAATTATGGAAAGGCTAGAAGAAGCATATGCTAATGCAGATGATATCGAGTTTATCAAGTCTTAG 1122 0.3975 MLADFGLAHASKVGSICLEAINTDIWGTPGPSSMFQKFNYREIKKATVDFSTIIGQGGFGTVYKAHFSDGLVAVVKRMNKVSKQGEDEFCREIELLARLHHQHLVSLRGFCGRTPLSWRTRIQISIDVANALIVGTTIYRCEDTFLVLLLIRNDIWRLGFVKFHPCAILLSVKQLLLNDPMTKEILCYAAQNTKLGYYCDRFSGLRVRFPVFKRSVIQRFFDSPLKSSVHLWVIYGAELSLSFRETLGKEKIPYDDETLSDVLFXRVKKCYKKLSNRVSSSSSSCVEDYVLLSHKEISALNVSFICKLSNGVPPPPPPPSHKQINAFNNKYKHIIKESVGDTSKTQVDEDGDIIMERLEEAYANADDIEFIKS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0867 373 FunFam Protein kinase superfamily protein 26 116 - -
Glsi01g0867 373 Pfam Protein kinase domain 51 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g0867 373 ProSitePatterns Protein kinases ATP-binding region signature. 54 76 IPR017441 GO:0005524
Glsi01g0867 373 Gene3D Phosphorylase Kinase; domain 1 27 115 - -
Glsi01g0867 373 SMART tyrkin_6 48 233 IPR020635 GO:0004713|GO:0006468
Glsi01g0867 373 SUPERFAMILY Protein kinase-like (PK-like) 31 132 IPR011009 -
Glsi01g0867 373 PANTHER OS01G0750732 PROTEIN 34 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0867 Glsi-ChrGlsi01 18504461 18522451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0867 2 30 Receptor kinase-like Gene Family AT3G19300 79.310 3.51e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Glsi01g0867 Pkinase 3.4e-09 CL0016