Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0863 ATGTGTCTCTCCTCAGAATTAAGGAAGATTGTATCTTTGAAGTTCTTTGAAGTTAAGGCCACTGGCGGGGACACTCACCTTGGAGGAGAGGACATTGACAACAGAATGGTGAGCCACTTTGTGCAGGTGTTTAAAAGGAAGCATAAGAAGGACATTAGTGGGAATCCAAAGGCACTTAGGAGGCTACGAACCGCGTGTGAGAGGGCAAAGAGGATACTCTCATCCGCTGCTGAAACCAACATTGAGATAGATTCTTTATATGAGGGCATTGACTTTCATTCATCAATCACTCGCACTAGGTTTGAGGAACTGAACATGGATCTCTTCAGGAAGTGTTTGGAGACAGTAGAGAAGTGTCTTTGGGATGCTAATATGGACAAGATCAGTGTTCATGATGTTGTCCTTGTTGGTAGATCTAGTAGGATTCCCAAATTGCAGCAGTTATTGCAGGACTTCTTCCATGGGAAGGATCTCTGCAAGAACATTAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCTATATTGAGTGGCGAAGTCAATGAGAAGGTTCAAGACATTTTGCTGATGGATGTCACCCCATTGTCCTTAGGGTTGCAGACAGAAGGAGGTCTCATGAATGTAATAATTCCAAGGAACACTATCATTCCTACAAGCATGGAAGATTCATTTACTACACATTTGGATAACCAAAGCAATGTCTTGATTCATGTTTATGAGGGTGAGAGAACAAGTACTAAAGATAACAAGTTACTAGGTAAATTTGTGCTAAGCATTCCTCCAGCTCCTAGGGGTGTTCCTCAGATCAAGGTTTGCTTTGCCATTGATGCTAATGGTATCTTAAATGTCTCTGTTGACGAACAAACCACTGGGGTGAAGAAAAAGATTACCATAACCAATGAAAATGGAAGACTATCAAAGAAAGAAATTGAAAGAATGGTTCAAGAAGCTGAGAAATACAAGGCCGAAGATGAGAGGTACAAGGAGAAGGTTAAAGCAAAGAATGATTTGGAGAAATATGCATACAACATGTGGAATGCTATAAAGGATGAGGGCATTGGCTCAAACCTTTTCCCAACAGATAAGAAGAAGATTGAGAGTGCAATTGAGATGACCTTACTGTGGCTAGACTCCAACCAGCTTGCAGAAGTTGATGAGTTTGAGTACATGATGAAGGAGCTTGAGAGAATCTTTAACCCCATCATATTGAAGATGTGGCAAGATTTGGATGATGGTGTGCCTCCTGCTGCTGCTGGTACTGTTGCCGGCATCAGAATTAACAAACGAAAGCGTGCCATTTTATTAAAATTGGCAGAATTTGCTTTGCAGGCGACAATTTCAGCCATATTTGGTAATTTTCCTGGGGTGGTTAATGCATTTAGTTCCCTTATTTCAAATTGTTAA 1413 0.414 MCLSSELRKIVSLKFFEVKATGGDTHLGGEDIDNRMVSHFVQVFKRKHKKDISGNPKALRRLRTACERAKRILSSAAETNIEIDSLYEGIDFHSSITRTRFEELNMDLFRKCLETVEKCLWDANMDKISVHDVVLVGRSSRIPKLQQLLQDFFHGKDLCKNINPDEAVAYGAAVQAAILSGEVNEKVQDILLMDVTPLSLGLQTEGGLMNVIIPRNTIIPTSMEDSFTTHLDNQSNVLIHVYEGERTSTKDNKLLGKFVLSIPPAPRGVPQIKVCFAIDANGILNVSVDEQTTGVKKKITITNENGRLSKKEIERMVQEAEKYKAEDERYKEKVKAKNDLEKYAYNMWNAIKDEGIGSNLFPTDKKKIESAIEMTLLWLDSNQLAEVDEFEYMMKELERIFNPIILKMWQDLDDGVPPAAAGTVAGIRINKRKRAILLKLAEFALQATISAIFGNFPGVVNAFSSLISNC 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0863 470 SUPERFAMILY Actin-like ATPase domain 15 179 IPR043129 -
Glsi01g0863 470 Gene3D - 308 411 IPR029048 -
Glsi01g0863 470 PRINTS 70kDa heat shock protein signature 130 146 - -
Glsi01g0863 470 PRINTS 70kDa heat shock protein signature 269 285 - -
Glsi01g0863 470 PRINTS 70kDa heat shock protein signature 162 182 - -
Glsi01g0863 470 PRINTS 70kDa heat shock protein signature 189 208 - -
Glsi01g0863 470 Gene3D Actin; Chain A, domain 4 29 111 - -
Glsi01g0863 470 Coils Coil 313 340 - -
Glsi01g0863 470 Gene3D - 14 159 - -
Glsi01g0863 470 FunFam Heat shock 70 kDa 184 337 - -
Glsi01g0863 470 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 185 341 IPR029047 -
Glsi01g0863 470 Pfam Hsp70 protein 16 408 IPR013126 GO:0005524|GO:0140662
Glsi01g0863 470 FunFam Heat shock 70 kDa 28 111 - -
Glsi01g0863 470 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 180 307 IPR029047 -
Glsi01g0863 470 PANTHER HEAT SHOCK PROTEIN 70KDA 14 373 IPR013126 GO:0005524|GO:0140662
Glsi01g0863 470 Gene3D - 160 177 - -
Glsi01g0863 470 FunFam Heat shock cognate 70 kDa protein 2 112 159 - -
Glsi01g0863 470 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 336 412 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0863 Glsi-ChrGlsi01 18141652 18143064 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0863 15 422 Calmodulin-binding Proteins AT3G12580 74.817 0.0 622