Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0842 ATGGGTACAGTTTGGGAAGAAAAAATGGGTTTTGATTTTGGAGGACATATTTTGAGAGCTGCAGAGACAAATCTATGCTCAAGGAACCTGTTGTTTCCCCCTCTATATTGTTGTGTTGTTTTGGGATCGGCTGGTAGTGTTGGAGAAATGAATGATACTTCTGGGAAGACGTCTTCGTGTTTGGCAATCACCGAGAAGAAGAAGCAAAGACCCGGTGGCTGCATTGGCCTTTTCTTTCAGCTTTTTGATTGGAACGGGAAACTCGGCAAGAAGAAACTCTTCTCCAAGAAACTTCTACCTCCTGCTCGTTCAGAACAAGCCTCTAAAAAGTTTAAAGGCGATGGGAAAATGTCAACCTCCAGGCTCCACTTGATTGCTAATGAAAACAGTGGAGGTTTTCCAAGTTCCAGAAAAGGCGGAAACCGTGGTGTAGATGTAGAACAAAAGCATGAAATGCGAGTTCCAGGTTTAATAGTTAGGTTGATGGGTCTAGAATCCATTCCAGCTGCTCAGCGAGATAAGTCCAAGAAAGCTTCGGTTTCTGATATTTGTGGTGATGGGAAGGAAGAATCTACGGGTAATCATGGCGAGTCAGATAGACAAGTTGTGAATTCGGAAACAACAGTTGCAAGGCATGATTCAAGACCTCAAAAGCTTCAGAAAACGGGGACAAAGGCAGTGACTAGGTTCGGAGCCGAAGCCCTGCAAATTAAGGGTGTTTTCTCACGAGCAAGGAAGCATAATAATAATCAGCACCACCCAAGGCTTGCTTCTCATCTGACGGGTCCTAGAATTACTTCTGGAAAGAATATGTCTCGAAGCTCTAGGTTAATAGGAGCAGCAACTAAGATTTTGGAACCTGGGCTGCAAGCTACAAGCAGAGCAAAATGCTCTCTTACATATTTGAATTCCATATATCCTCCTAAAAATGACATTTTAACAGATCGCGTGGGGACTAAGCCAGCGAATCTACAAAACCAAACTGGTTATGATGGCCATGCTGCAAAATCTTTGATGGGGTCCATGGGGAAGACTTCTTGCAAAAATTGTGGTAATTTGCTTGATGTTGTTGACTGCAATCCGGATGCTGAAGGACGGCTTGCTGTTTCTCCTCCTGCCATATCAGAAATTATCACTACCTCCTCTATGGCATCAGCACATAGGAAGGTTAGGTCCTTCATGACCCCTCATGAACAAGAAAGAGATGTGGTTCTTCTGAGACCTCAAGAACGTCTCACATCTATCGTTGAAGAAGAGGGAAGAAGTAATATACAGCATTGTCACGAACCCTCTATCAGAAGAATGCCTTTGCCTTGTGAACGTCCTGCCCCATGGAATTCATTGCACCAAACATGTAGGACCCTAGAGGATGATGCATCTTCTGCTGCCTTCAAGCACAAAACTCGAACACAAGAACAGTTATTAAGCAGTGAGAGAATTTCACCTGGATCTAAAGTGCGTAATCTGCAAACAAAAAAAGTATCATCAGATGCAAACACTGTGAGTAGGACTAAAGACTTTGTTGCTTTGAATAGAAACCTAAGTGGTCGAACCAGGTTGAGGTCACCTACCAAAGTTGAAACTTTGAAGTTTGATCTAGACAGAAAACCTTGTAATAGGCATGATGATTCCTTGTCTCATATAAGGACAATGGAACGTAAAAGAAGGATCTCAAATATCGGGCAAGTTGAAAGTACAGCTTCTGCCAATTCAGCCATTGTGAAACAGAGAAATTTTCGTTCTGACGCACAGTTTGGAAAAAGGAGGGACGTTAGTGCTTCTTCCATAAACAGTAGTAATGTTAAATGTAAACAAGGTGATCAGCGAAAAACATACAAATTTAATGACAATCAGGTCAATGATGTAGTTTCATTTGCATTTAATTCCCCATTGAAGCACAAGACAGGAATCGCCCCAGAAAAGGAAGAGACAAGCAGCGATAATGAGATTAATACATATTTCCAGAAATCCTTGAAAAGAGATGCTTTAGGTGCCTTTCTAGAACAGAAATTGAAGGAATTGACCTCTCAAGATGAGGAGTTGGCTATTGGTGCTCCGCCTAAAAGGTCACCTGCCATGGTTCTTCAAGAGCTTATATCTGTACTAAGTGCGGAGCAACTGATTTGTCTTGATGGTCAGATGGTCAGTGGGGACAAAGATTTCCATGATGGGGCAAAACAAGGAAGGTTAGTTGGAGCCGCTTGTAATGTTAATCATCTCAGTCCTGGATCTGTTCTGGAAGCTTCTTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGCATGATTTGCACCCTGAGTCTATGAATTACTCATATGATCAGTTAGAACATGATGCTGAGCTTTTAAATTCTGTAACATCATTGAACAAAGGGAAGATAGGTAGTGAGGTATCGACTGAGATTGTCAACCAAATTTCTAAGATATTAGGAAGTCTAAGTTCATTTTGGGCAAGATTGAGGAGAACCGAGCTCACCCATGTGAAAGATGTTATGCTGAATGCTGAATTGTTGCTTGGAAGTTACACCGCCGTGCACAGTGAAAATGAAGTGCCACGTCTTTTCATTTCTCACTTTCTCCTTTATGAGCTGGACAACATGGTGGATGATGCCATGTGGACAGATTTGAATGGCTTTCTGGGCTGCGAGGATTCTAAAGAGAGAAGGCAACTTAAGGGATTTCTCTTTGACTGTGTTATAGAATATCTAGAATCAAATTGTAGCACATATTGTAGGTGTGGATTCAGGGCATGGACAAAGCTGCCTTTATGCATGAAAAGTGGCATGTTGATTCAGGAGATCAAGAGGGTGATTAAGAAGTGGGCATGTATAGCTGGGATGATACCTGATGAGATAATAGAATGGGAGATGAGCCACTCCAGGGGGAAATGGACGGATTTCGATGTTGAAGCATTCGAGTCTGGTGTTGAAATAGATGGGGACATACTTCAAATTTTGGTTGAAGAAATTGTTGAAGACCTTGTAGATTGTAGGGGGTCACCATTTGAATCTATAACTAGATCTTACTACTAA 3030 0.4201 MGTVWEEKMGFDFGGHILRAAETNLCSRNLLFPPLYCCVVLGSAGSVGEMNDTSGKTSSCLAITEKKKQRPGGCIGLFFQLFDWNGKLGKKKLFSKKLLPPARSEQASKKFKGDGKMSTSRLHLIANENSGGFPSSRKGGNRGVDVEQKHEMRVPGLIVRLMGLESIPAAQRDKSKKASVSDICGDGKEESTGNHGESDRQVVNSETTVARHDSRPQKLQKTGTKAVTRFGAEALQIKGVFSRARKHNNNQHHPRLASHLTGPRITSGKNMSRSSRLIGAATKILEPGLQATSRAKCSLTYLNSIYPPKNDILTDRVGTKPANLQNQTGYDGHAAKSLMGSMGKTSCKNCGNLLDVVDCNPDAEGRLAVSPPAISEIITTSSMASAHRKVRSFMTPHEQERDVVLLRPQERLTSIVEEEGRSNIQHCHEPSIRRMPLPCERPAPWNSLHQTCRTLEDDASSAAFKHKTRTQEQLLSSERISPGSKVRNLQTKKVSSDANTVSRTKDFVALNRNLSGRTRLRSPTKVETLKFDLDRKPCNRHDDSLSHIRTMERKRRISNIGQVESTASANSAIVKQRNFRSDAQFGKRRDVSASSINSSNVKCKQGDQRKTYKFNDNQVNDVVSFAFNSPLKHKTGIAPEKEETSSDNEINTYFQKSLKRDALGAFLEQKLKELTSQDEELAIGAPPKRSPAMVLQELISVLSAEQLICLDGQMVSGDKDFHDGAKQGRLVGAACNVNHLSPGSVLEASFSSSSLDESSGHDLHPESMNYSYDQLEHDAELLNSVTSLNKGKIGSEVSTEIVNQISKILGSLSSFWARLRRTELTHVKDVMLNAELLLGSYTAVHSENEVPRLFISHFLLYELDNMVDDAMWTDLNGFLGCEDSKERRQLKGFLFDCVIEYLESNCSTYCRCGFRAWTKLPLCMKSGMLIQEIKRVIKKWACIAGMIPDEIIEWEMSHSRGKWTDFDVEAFESGVEIDGDILQILVEEIVEDLVDCRGSPFESITRSYY 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0842 1009 MobiDBLite consensus disorder prediction 169 223 - -
Glsi01g0842 1009 MobiDBLite consensus disorder prediction 466 488 - -
Glsi01g0842 1009 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 60 992 - -
Glsi01g0842 1009 MobiDBLite consensus disorder prediction 170 196 - -
Glsi01g0842 1009 Pfam DUF761-associated sequence motif 147 173 IPR032795 -
Glsi01g0842 1009 MobiDBLite consensus disorder prediction 246 273 - -
Glsi01g0842 1009 Pfam Domain of unknown function (DUF4378) 824 988 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0842 Glsi-ChrGlsi01 17102712 17107252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0842 47 993 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.102 4.18e-83 285