Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0810 ATGTTGTTCAGGATTAAGTCCACTCACAAGATGGCCAGCACTGGTAAAAACAAGAAGGGCGTTCTTTGCAAGCAAACTCTTGAGCAAGAGACAGTGCACGTGGTGCTGACGCTTAATGATTTTAGTACTTGCATTGGATTCACTGGGTCTTTTGCTCTTAGAACGTTCCCTATCTATATAGCCAGGCTTTGTGTTACTGTTTTTTTATCTTACTTTCCTTCAAATCTTCAATCAATGTCTTCCTCTGGTTCATGGACTGCTAAGGACAACAAAGCGTTTGAAAACGCTCTTGCTGTTTATGACAAGGAAACCCCTGACCGTTGGCACCATGTTGCCCAGGTTGTTGGCGGTAAAACTCCAGAAGAAGTGAAGAGGCACTATGAACTCCTTGTGGAGGACCTCAAGCGCATTGATTCAGGGCAAGTGCCCATTTACAATTAG 441 0.4399 MLFRIKSTHKMASTGKNKKGVLCKQTLEQETVHVVLTLNDFSTCIGFTGSFALRTFPIYIARLCVTVFLSYFPSNLQSMSSSGSWTAKDNKAFENALAVYDKETPDRWHHVAQVVGGKTPEEVKRHYELLVEDLKRIDSGQVPIYN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0810 146 CDD SANT 84 131 IPR001005 -
Glsi01g0810 146 Pfam Myb-like DNA-binding domain 83 127 IPR001005 -
Glsi01g0810 146 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 77 144 IPR044636 GO:0003700
Glsi01g0810 146 ProSiteProfiles SANT domain profile. 80 135 IPR017884 -
Glsi01g0810 146 SMART sant 81 133 IPR001005 -
Glsi01g0810 146 FunFam Transcription factor SRM1 77 144 - -
Glsi01g0810 146 SUPERFAMILY Homeodomain-like 84 137 IPR009057 -
Glsi01g0810 146 Gene3D - 77 144 - -
Glsi01g0810 146 ProSiteProfiles Myb-like domain profile. 77 131 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0810 Glsi-ChrGlsi01 15417905 15418696 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi01g0810 Myb_DNA-binding 2.8e-06 CL0123