Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0787 ATGATAAAAATGCGCTCACCACCATTTGATGTTTATTGTTCAATTTTTATTTTGAGGACGATGCTCTGCCTATTGACCAAAATGTATACTTCAAGAAAGAAAATCCACAAGGACAAAGATGCTGAGCCCACTGAATTTGAGGAGACAGTTGCACAGTACTTATTTGATTTGGAGAACACTAATCAGGAGCTGAAAAGTGACCTGAAAGATCTCTACATCAATCAAGCAGTTCAGATGGATGTTGCTGGGAATCGCAAAGCTGTAGTTATCTATGTACCTTACAGATTGAGGAAGGCATTCCGCAAAATTCATCTACGACTTGTCAGAGAATTGGAGAAAAAATTCAGTGGGAAGGATGTTGTCTTGATTGCTACAAGAAGGATTGTGCGGCCACCAAAGAAAGGTTCTGCTGTGCAGCGACCCCGCACCCGCACATTAACAGCTGTCCATGATGCCATGATGGAGGATGTTGTGCATCCTGCTGAGATTGTTGGCAAACGTATCAGATATCGAATTGATGGATCAAAAATAATCAAGGTATTCTTGGATCCTAAGGAGCGCAATAACACTGAATACAAGCTAGAAACTTTTTCTGGAGTTTATAGGAAGCTTACTGGGAAAGACGTAGTATTTGAGTATCCAGTCACAGAACCATGA 657 0.4094 MIKMRSPPFDVYCSIFILRTMLCLLTKMYTSRKKIHKDKDAEPTEFEETVAQYLFDLENTNQELKSDLKDLYINQAVQMDVAGNRKAVVIYVPYRLRKAFRKIHLRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRTRTLTAVHDAMMEDVVHPAEIVGKRIRYRIDGSKIIKVFLDPKERNNTEYKLETFSGVYRKLTGKDVVFEYPVTEP 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0787 218 PANTHER 40S RIBOSOMAL PROTEIN S7 28 217 IPR000554 GO:0003735|GO:0005840|GO:0006412
Glsi01g0787 218 Pfam Ribosomal protein S7e 34 213 IPR000554 GO:0003735|GO:0005840|GO:0006412
Glsi01g0787 218 ProSitePatterns Ribosomal protein S7e signature. 106 119 IPR000554 GO:0003735|GO:0005840|GO:0006412
Glsi01g0787 218 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0787 Glsi-ChrGlsi01 13843534 13845524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0787 28 217 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 81.579 9.17e-116 326