Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0783 ATGGGGCAGGCATGGCCTGTTCAAAAATCAATATCTTCTGTTGGCAGGCCTGATCAAGCAGGGAAGAAATGTGAACCAGAATATTTAACAATACCAAATGATGGGACAGATGTTTGGGAAATAGAACCTAAACATTTGAAGTATGGAAATAAAATTGCATTTGGGTCATTTGGTGAACTGTTTAAAGGTACATATTGTAGTCAGGAAGTGGCCATTAAAGTTCTTAAGGCTGAGCATGTAAGTTCAGATTGGCAGAGAGATTTTACCCAGGAAGTCTTTATCATGAGAAAGGTTAAGCACAAGAATGTTGTTATCAAGGTTGCTGATTTTGGGGTTGCTAAAGTGAAAGTTCAATCTGGAGTTATGACTGTAGAGACTGGAACATATAGATGTATGGCTCCCGAGCATCATATATATCCAACTCCTCTTCCTCATTATGGTCGTTATCCGTGCACTTTTGATGTTTTGTCTTTTGAAACCAAGGGCAATGGAATTTTTTATGTTTCAAAGGTACTTCTAGGCTTTAGCAGCATGGAAAGCTACCTGCAAAGTCGCTAG 558 0.3907 MGQAWPVQKSISSVGRPDQAGKKCEPEYLTIPNDGTDVWEIEPKHLKYGNKIAFGSFGELFKGTYCSQEVAIKVLKAEHVSSDWQRDFTQEVFIMRKVKHKNVVIKVADFGVAKVKVQSGVMTVETGTYRCMAPEHHIYPTPLPHYGRYPCTFDVLSFETKGNGIFYVSKVLLGFSSMESYLQSR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0783 185 Pfam Protein tyrosine and serine/threonine kinase 46 104 IPR001245 GO:0004672|GO:0006468
Glsi01g0783 185 MobiDBLite consensus disorder prediction 1 15 - -
Glsi01g0783 185 Gene3D Phosphorylase Kinase; domain 1 37 113 - -
Glsi01g0783 185 ProSiteProfiles Protein kinase domain profile. 46 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g0783 185 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 39 104 - -
Glsi01g0783 185 MobiDBLite consensus disorder prediction 1 21 - -
Glsi01g0783 185 SUPERFAMILY Protein kinase-like (PK-like) 37 138 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0783 Glsi-ChrGlsi01 13771870 13774435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0783 69 135 MAP Kinase Kinase Kinase AT4G38470 50.000 5.80e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Glsi01g0783 PK_Tyr_Ser-Thr 4.8e-08 CL0016