Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0775 ATGCGGATGAGCTGCAATGGATGCCGGGTTCTAAGGAAAGGTTGCAGTGAGAATTGTAGTATTAGACCCTGTTTGCAGTGGATCAAAAGCCCAGAGTCTCAAGCCAATGCTACTGTGTTTCTTGCCAAGTTCTATGGCCGTGCTGGCCTCATGAACCTTATCAACGCTGGCCCTGAACATCTTCGTCCAGCCATTTTTCGTTCTTTGCTGTACGAAGCATGCGGGCGGATATTGAATCCGATTTATGGTTCCGTGGGTCTGTTATGGTCCGGAAGCTGGCAGCTCTGTCAGGTCGCCGTGGAAGCGGTGTTGAAGGGCGTGCCGATCACTCCGATCAACTCCGAAGCCGCCGTGAGTAGACTGGGCCCACCGCTGAAGGCTTATGACATACGCCACGTGTCCAAGGACGAGAACTCGACCCATACACACGATGCTCAACGTGTCAAGACTCGGTCGCGGTTCAAGCGGTCTGTTGTCAAGACAAAGAAAGCTCGCCAGGGGGGCGGTTTGGGGTCCGTTGAACCGGAAGAACCGCGCAATGGTAACCACATGATTGATGGGCGGACCATGTGTTGTGCCGCCGAAGAGGTGCTGAAGCGGTCGGCGAGTCACGAATCGTCGCTGAGTCACCAGTCTGAGGCCCCGAACATGGCGGAGGGCGAGAGCAAAGAGAGCGAGAGTATAATTTCCATGGAGATTCCCGAGACTTCGATCCTCTTTCGAGACGAACCAGAATCGACGGCGAAACGCACTGACCGAGCCGACCAGAGTGCCAATGTGGCACTAGAGCTAACTCTCGGTTTTCAGCCGGCTTCACCTGCACAGCATGTGGTGCCGGTGAAGAAGAGAAGGTTGGAAATGAAGGACTGCGATGGCTTGGCTGAGAACAGCTGGTGCAAGATGAAGCTGGGGCTTGAATACCCGGCGTGA 930 0.5495 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRILNPIYGSVGLLWSGSWQLCQVAVEAVLKGVPITPINSEAAVSRLGPPLKAYDIRHVSKDENSTHTHDAQRVKTRSRFKRSVVKTKKARQGGGLGSVEPEEPRNGNHMIDGRTMCCAAEEVLKRSASHESSLSHQSEAPNMAEGESKESESIISMEIPETSILFRDEPESTAKRTDRADQSANVALELTLGFQPASPAQHVVPVKKRRLEMKDCDGLAENSWCKMKLGLEYPA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0775 309 MobiDBLite consensus disorder prediction 134 185 - -
Glsi01g0775 309 MobiDBLite consensus disorder prediction 148 162 - -
Glsi01g0775 309 MobiDBLite consensus disorder prediction 202 227 - -
Glsi01g0775 309 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Glsi01g0775 309 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 266 - -
Glsi01g0775 309 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Glsi01g0775 309 PIRSF AS2 1 307 IPR017414 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0775 Glsi-ChrGlsi01 13524624 13525665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0775 1 285 AS2 family AT3G02550 56.401 2.00e-102 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi01g0775 LOB 1.6e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g0775 01 13524624 13525665 Glsi01g0775 01 13524624 13525665 ECH