Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0768 ATGTCGCCCACCGATTCGTCACGTGAAGAAAATGTTTACATGGCCAAGTTGGCCGAGCAAGCAGAACGGTACGAGGAGATGGTTGAGTTTATGGAGAAAGTTGCTAAGACAGTGGATGTTGAGGAGTTGACAGTAGAAGAGAGGAATCTCCTTTCTGTGGCTTACAAGAATGTGATTGGAGCTAGGAGGGCTTCTTGGAGGATCATTTCATCCATTGAACAGAAGGAGGAGAGTAGGGGTAATGAGGACCATGTTGCTGTTATAAAGGAGTACAGAAGCAAGATTGAGTCTGAACTCAGCAAGATCTGTGATGGGATTTTGAACCTTCTTGAATCTCACCTTATCCCATCTGCTTCATCTGCCGAGTCTAAAGTGTTTTATCTTAAGATGAAGGGTGATTATCACAGATACCTGGCTGAGTTTAAGACTGGAGCGGAGAGAAAAGAAGCTGCTGAGAGTACTTTGTTGGCTTACAAGTCTGCTCAGGATATTGCTCTCGCTGAACTGGCCCCTACACACCCAATAAGGTTGGGACTTGCTCTCAACTTTTCTGTGTTCTACTATGAAATCCTTAACTCCCCAGATCGTGCTTGTAATCTTGCAAAGCAGGCGTTCGATGAGGCAATTTCTGAACTTGACACATTGGGTGAAGAGTCATACAAGGACAGTACATTGATCATGCAACTTCTCCGAGACAATCTGACTTTGTGGACGTCTGATATCACGGACGATGCTGGAGATGAGATCAAGGAATCTAAGCAACACTCAGTCGACGGGCAGCAGTAA 786 0.4517 MSPTDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIKEYRSKIESELSKICDGILNLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKESKQHSVDGQQ 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0768 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Glsi01g0768 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Glsi01g0768 261 PIRSF 14-3-3 3 250 IPR000308 -
Glsi01g0768 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Glsi01g0768 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Glsi01g0768 261 Gene3D - 1 251 IPR036815 -
Glsi01g0768 261 SMART 1433_4 8 251 IPR023410 -
Glsi01g0768 261 FunFam 14-3-3 protein epsilon 4 251 - -
Glsi01g0768 261 Coils Coil 14 34 - -
Glsi01g0768 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Glsi01g0768 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Glsi01g0768 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Glsi01g0768 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Glsi01g0768 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Glsi01g0768 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Glsi01g0768 261 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0768 Glsi-ChrGlsi01 13204682 13207097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0768 6 255 14-3-3 family AT3G02520 90.837 9.99e-171 470