Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0742 ATGCATACAAGGGGTAATAATCTGGGGAGTACCTGGAGCCAAAGACCCAAACATTCTTTGTCAAATGTCCCAATCCAACCTCTGCTGGGAAGTTTTGATTTACGTCATCACTATGTAGGAAATCAAGTTGGCTCTTTGACAGACTGGCGTAAGGATCCCAGAATTGGCTGCATCCGTGATTTGATGAGAAATAAAATTGCTGCAATTTTCAGTTCCAATTTACTATATGAGGGCGTGCAGCAGGTATCCGATATTGCAACTATTCTGGAACACCAGCTATTTATCAGTGCTGCTTCAAAGGATGAGTATATTAACCAGGAGACATTTATAAAACGATTGCAGAATCAAGTCCCAAACTTTCCTGGAACAAAATATAGTCAGCAATTGGACAGCTCTATTACCTTCACACCGATGAAGGTGGCCTCTTCTGGATTATCCCATACTTGGTGTGATGAAAATCTAGAAGATCCTGCTTTACAGAAGTTATCTGACACTATCATCAATTCAACCGATTATTGCACGGTGACCGTAAACAACACTAGTAAATATGAATTTTCCAAAGGCGGGCTACCTGATCATTTTATTGTCAATGAGACAGTTTTTTCTCCTAATGACTGTTCAACAATCACTACGTGCACTGATATGGATGGGTTTTCTAACTTCTCTGCTTCTGGTGGAACAAGCAATCTGGAGACTAGCTCCAAATCAATTAGCTCCCATTTCCAGCGGCAACATGTAGATGATGGTGCATTAAATAGTCTTTTGGAGATGGATCTGATTAAATATAGAGGTTGTTTGGGGATTAACAAGGAAAATGAATCTACGGATTTTATTGATACACTGGGAGAATCCCCACAATCTGGATCGTTAAATTTGTTGATCCCTGGACATGTGCCAAGGGAAGTTTCTAAAGTTTCTGATCTTTTTCCTTGCAAGTGCTCTAGCTGCCAGATTGTAACCCTTGAGAATTTAGAACAATGTCAAACCCAGAATATGGATTGTCAACAGAACTTCAAGCATTTTAAGCAGTCATATGAGCATTGTGGCAATGCATTTATCACCCAGTCAGGATCATGCTTTGTAAGTAAATATGAACCATGCGGTCAATTGCTAGGGCAGAAAACGTTGAAGCAGCCACAGCTTCCTTTAAGACTTCTGAATGGGGATCCACAATTTTCTTCAGAAAGTTCTGCATGTCTTTATGGTTCAAATGGAGCTGCCAGTGTAACTTCATGTGACAGTTCCAAAGTTTTGGTTGAACACAAGATCTTACTTGCATATCTTCAGTACAAGAATTTAAACAATGTTCCAGGGGATAATCAAATTTCCTTAGTTAAATATGTGCATTCAACAGTATGTAATAATGGGGTGTGTATATGTGAACAGTATATCACCCTGTCAATGCATTTTGATAAATGTCAAAGTGGTGATTGCCATATATGCTTCCCTTTGAAACTATTATTTTTAACTGAACTTGATCCTCGTTTGGAATTCGCAAACAGTGTGATTATGGATTCTCCTATGGCTCGACCCTATTCTCCTGAAGGACTTTCAGAATTGCAGCAACAGCCAGAATCTCCTCTTTCTATCTATTCTGAAGTTACAGAGATTAATATGGAGTCATTTACAAATGCTATGCTAGATTCTGCAAGTGTTGGCAAGATAAACAAGAATGTGATTGATGTTCCATTTGAGCTGACTTTTGAGAGAGAAAATATTTCCGAAGGCATAGAAGCTGGTGATATATTGGAGGAGTCATTCCCCAAAAGCAATTATGCTATAGCCAAGAACCTAAGGGAAAATGTTAGCGGATTGAATACCAGTAACTATTCTTTCCAGAAAGATCCTAGTGCTGCTACAGAGGAGGCACAGGGCAGAAGTGGGTTGAACCAGACTGGGGAAAACGCTACAAAGAAAGTTATTGAGCCAAAAGCTGATTTAGAGAGGGGAACAGAGTGTTTAATTCCATTAATAAGTGATGTTTCCTATGGTGCATTTGAACAGACTTTTGAGAGTGGAACTATTTCCGAAGGCATAGAAACTGACCATATATCAGAGGAGTCGTACCCCAAAAGCGATGATGTGATAGCCAGAAACTTAAGCAAAAATGTTTGCAGTTCAAATTCCAGTTTTAATACTTTCCAGAAAGATCCTAGTGCTGATATAGAGAAGGTTCAGGATGGAAGTGGGTTCAACCAGATTGGGAAAAACACTACAAGGAAATTTATTGAGCGGAAAGCTGATTTAGAGAAGGCAACAAAGTCATCAAAACCAATAATAAGTGGTGTTTCTTTGACTGAAATTTTCACATATAATCAAATAAGGGAACATATTTTGAGTCTAAGGCAGCATTTTGGTCAGGTCAGTACACCCCCTTTTGGTGGTTACCACTACCTTGGTCAGCTAGGGGCTAAGGAGTGGGGTCTGTCAGACAGAGTCCCTGCTAAGGATAGTACACATGAGGAAGAAAAGGGAATGGGTGTTAACTCATGCCAACTATGTGCAATGGATAAGCTTTTGTTTGCACCAGTACCGATCTATTGCCTATCTTGTGGCAATTGCATCAAACGAAATGCAAATTTTTACTGTAGAAGAGCAGAAGAATTTGATATACAACATTGCTTTTGCACCCCTTGTTATAGGAATTCACGAGGTGGGTCTATCAAATTCAATGGGGTATCTATTTTCAAGACAACGCTTGATAGGAAGAAAAATAATGATGTAACTGAAGAATCGTGGGTTCAATGTGATAAATGTGAAAGATGGCAACATCAGATATGTGCACTCTTTAACAATAAGAGAGATTTGGAAGGCAGTGCTGAGTATGTGTGTCCCAGATGCTGCTTAAAAGAAATTGAAAATGGAATCCGTGTACCCTTACCAGTGACTGCTATTTTTGGCGCTAAGGACTTACCAAGGACCATGCTTAGTGACCATATTGAGCAAAGACTTTTTGAGCGTCTTGAGCAAGAGAGAGCGAACAAGGCAAAAGTTGAAGGAAAGAATATTGATGAGATTTTAGGAGCAGAAAACCTTGCTGTAAGAGTGGTGTTATCTGTTGAAAAACAATTGAAAGTGAAGAAGCAGTTTCTTGACATCGTTTCTGTGGAGAATTACCCTGCTGAGTTCCCATATAGGTCAAAGGTTATTCTTTTATTTCAGAAGATCGAGGGAGTAGATATATGCATTTATGGAATGTACGTCCAGGAGTTTGGCTCAGAATGTGGTTACCCAAATCAACGTTGTGTGTATATCTCATATCTTGATTCTGTCAAGTATTTTAGGCCTCAAAGAGAGACTGTGACTGGAGAAGCTCTTCGTACGTTTGTATACCATGAAATACTGATTGGATACCTTGAATTTTGCAAGAAACGAGGTTTTGCAACCTGTTACATTTGGGCATGTCCTCCTATAAAAGGGGAAGATTATGTACTTTATTGCCATCCTGAGAATCAGAAAACTCCGAAGAGTGATAAACTAAGGCAGTGGTATCATTCAATGCTAAGAAAGGCAACTAAAGAAAATATTGTAGTTGGTCTTACAAACATGTATGATCATTTCTTTGTTCCTGCTGGAACATGTGTCTCCAAGGTGACAGCTGCTCATTTGCCATATTTTGATGGAGACTACTGGTCTGGGGCTGTTATGGATTTAATCAGGAACATTGAACAAGAGAGTGAACGGGAGTATGATAGAAAGGTGAAGACGCTAATGACTAAAAGAGCTCTAAAGGCAATGGGACATACAAATCCTTCTAAAGGTACCACCAAAGACATTCTGGTGATGCAAAAATTGGGCCAAACTATACTACCTGTCAAGGAAGACTTCATAATAGTCCACTTGCAGTATGCATGCACGCACTGCCATGAAGTGATATTGTCTGGGAAGCGATGGTTTTGCAGCGAGTGCAAGAAATACCAGCAGTGTGAAAGATGCCATACAGCTGACACACATACTTCAATTAGTGGGGAGAAGCATACACTTTGCGAGGTCCTCGTGGATGATATCCCTTGTGATACTAAGGATAATGATATCGTCCTAGACAATGATTTATTTGAGAATAGGCATGATTTTTTGAGCTTCTGCCAAAAAAATCATTTACAGTTTGACACACTCCGTCGTGCCAAGCATTCCTCAATGATGATCCTCTATAATCTCAAGAGTCCTACTCTGCTGGCTGTTAGAGCAATATGTAGCATTTGCTGTAAAGACAATGTGTCCCAACTGAGTTGGCAATGTGATATTTGCTCAGAGTTCTCTGTCTGTTCAGCATGCTATAAGGAGAAAGGTGCTTATTGCCATGAGCACAAGTTGAGTCAATGTTCTTTAACAGCTCTATGTAGGTCAGGGAATCAAGGACTAAAGCAGAAACCTGTGCTGACACGTAAACTTCTGGAACTTATGCAGCATGCTTCACGATGTCACTCAACTCAAAGTCAGCCATGCTCTTACACAAACTGTCTTCAGATTAAAAAGTTGTTTTCCCACGCCAGTAGGTGCACTGTTAGAGCTGCTGGGGGCTGCGAACATTGTAAGAAGGCATGGCTGGGTATAAGTGTACACTCGAGGAATTGTAGGGAATTGGAATGTCGCATCCCACGTTGCATGGATTTGAAGAATCATGTAGAATGGATAGTACTGCAATCTGAATCTCGGCGTAGAGCTGCAGTTGAGGAATCAGTGAAGGGTATCAATGGAGGTTGCAGCACTCTCGTAGAATTCAAACTCACATTTCAGGAGAAAATATTGAAAACCATTTTGATACAATACAATCAAATTTCCAAGGGGAGGGGCGCAGCTAAAATTCCAATCTCTACACTAAAAACTACTATCCAAAGCCTAAAATTGTCAATGTCAACAAGTACAAAGGGTCCCAATGTCCATGACCCTAAATGA 4896 0.4003 MHTRGNNLGSTWSQRPKHSLSNVPIQPLLGSFDLRHHYVGNQVGSLTDWRKDPRIGCIRDLMRNKIAAIFSSNLLYEGVQQVSDIATILEHQLFISAASKDEYINQETFIKRLQNQVPNFPGTKYSQQLDSSITFTPMKVASSGLSHTWCDENLEDPALQKLSDTIINSTDYCTVTVNNTSKYEFSKGGLPDHFIVNETVFSPNDCSTITTCTDMDGFSNFSASGGTSNLETSSKSISSHFQRQHVDDGALNSLLEMDLIKYRGCLGINKENESTDFIDTLGESPQSGSLNLLIPGHVPREVSKVSDLFPCKCSSCQIVTLENLEQCQTQNMDCQQNFKHFKQSYEHCGNAFITQSGSCFVSKYEPCGQLLGQKTLKQPQLPLRLLNGDPQFSSESSACLYGSNGAASVTSCDSSKVLVEHKILLAYLQYKNLNNVPGDNQISLVKYVHSTVCNNGVCICEQYITLSMHFDKCQSGDCHICFPLKLLFLTELDPRLEFANSVIMDSPMARPYSPEGLSELQQQPESPLSIYSEVTEINMESFTNAMLDSASVGKINKNVIDVPFELTFERENISEGIEAGDILEESFPKSNYAIAKNLRENVSGLNTSNYSFQKDPSAATEEAQGRSGLNQTGENATKKVIEPKADLERGTECLIPLISDVSYGAFEQTFESGTISEGIETDHISEESYPKSDDVIARNLSKNVCSSNSSFNTFQKDPSADIEKVQDGSGFNQIGKNTTRKFIERKADLEKATKSSKPIISGVSLTEIFTYNQIREHILSLRQHFGQVSTPPFGGYHYLGQLGAKEWGLSDRVPAKDSTHEEEKGMGVNSCQLCAMDKLLFAPVPIYCLSCGNCIKRNANFYCRRAEEFDIQHCFCTPCYRNSRGGSIKFNGVSIFKTTLDRKKNNDVTEESWVQCDKCERWQHQICALFNNKRDLEGSAEYVCPRCCLKEIENGIRVPLPVTAIFGAKDLPRTMLSDHIEQRLFERLEQERANKAKVEGKNIDEILGAENLAVRVVLSVEKQLKVKKQFLDIVSVENYPAEFPYRSKVILLFQKIEGVDICIYGMYVQEFGSECGYPNQRCVYISYLDSVKYFRPQRETVTGEALRTFVYHEILIGYLEFCKKRGFATCYIWACPPIKGEDYVLYCHPENQKTPKSDKLRQWYHSMLRKATKENIVVGLTNMYDHFFVPAGTCVSKVTAAHLPYFDGDYWSGAVMDLIRNIEQESEREYDRKVKTLMTKRALKAMGHTNPSKGTTKDILVMQKLGQTILPVKEDFIIVHLQYACTHCHEVILSGKRWFCSECKKYQQCERCHTADTHTSISGEKHTLCEVLVDDIPCDTKDNDIVLDNDLFENRHDFLSFCQKNHLQFDTLRRAKHSSMMILYNLKSPTLLAVRAICSICCKDNVSQLSWQCDICSEFSVCSACYKEKGAYCHEHKLSQCSLTALCRSGNQGLKQKPVLTRKLLELMQHASRCHSTQSQPCSYTNCLQIKKLFSHASRCTVRAAGGCEHCKKAWLGISVHSRNCRELECRIPRCMDLKNHVEWIVLQSESRRRAAVEESVKGINGGCSTLVEFKLTFQEKILKTILIQYNQISKGRGAAKIPISTLKTTIQSLKLSMSTSTKGPNVHDPK 1631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0742 1631 ProSiteProfiles Zinc finger TAZ-type profile. 1453 1538 IPR000197 -
Glsi01g0742 1631 PANTHER CBP/P300-RELATED 253 1560 IPR013178 GO:0004402|GO:0006355|GO:0016573
Glsi01g0742 1631 ProSiteProfiles Zinc finger ZZ-type profile. 1280 1336 IPR000433 GO:0008270
Glsi01g0742 1631 SMART TAZ_2 1455 1536 IPR000197 -
Glsi01g0742 1631 SMART zz_5 1279 1325 IPR000433 GO:0008270
Glsi01g0742 1631 SMART zz_5 1392 1438 IPR000433 GO:0008270
Glsi01g0742 1631 SUPERFAMILY FYVE/PHD zinc finger 910 950 IPR011011 -
Glsi01g0742 1631 SUPERFAMILY RING/U-box 1260 1322 - -
Glsi01g0742 1631 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 900 948 IPR013083 -
Glsi01g0742 1631 SUPERFAMILY RING/U-box 1375 1437 - -
Glsi01g0742 1631 ProSitePatterns Zinc finger ZZ-type signature. 1398 1425 IPR000433 GO:0008270
Glsi01g0742 1631 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 965 1391 IPR031162 GO:0004402
Glsi01g0742 1631 SUPERFAMILY TAZ domain 1459 1543 IPR035898 -
Glsi01g0742 1631 Gene3D - 1279 1328 IPR043145 -
Glsi01g0742 1631 Gene3D TAZ domain 1451 1563 IPR035898 -
Glsi01g0742 1631 ProSitePatterns Zinc finger PHD-type signature. 874 947 IPR019786 -
Glsi01g0742 1631 MobiDBLite consensus disorder prediction 609 637 - -
Glsi01g0742 1631 Pfam Histone acetylation protein 1008 1221 IPR013178 GO:0004402|GO:0006355|GO:0016573
Glsi01g0742 1631 ProSiteProfiles Zinc finger PHD-type profile. 873 950 IPR019787 -
Glsi01g0742 1631 Pfam TAZ zinc finger 1463 1535 IPR000197 -
Glsi01g0742 1631 CDD PHD_HAC_like 875 947 - -
Glsi01g0742 1631 SMART PHD_3 875 948 IPR001965 -
Glsi01g0742 1631 SMART KAT11_2 998 1292 IPR013178 GO:0004402|GO:0006355|GO:0016573
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0742 Glsi-ChrGlsi01 12158922 12173340 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Glsi01g0742 HAT_KAT11 4.6e-28 CL0257