Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0725 ATGCAGAGAAAGGAGCCATGGTGGAATAAGAGTTCCATGTGGCCACGAAGTCTGTCAAAGTGGGGATCACCACTATCTGCGATCTGGGACGCGAACGCCGCGCGTTTTGGATCGCGCAATTGGGGACACGATTCGGAAGTGAAGACACCGACCCAGGAGAAAAGCTTGATGGTTCAGATGGCAAGAGTAAGGGATAGAACAGAGGATTTTAAAGATGCTGTACGGCAGAGTGCTCACTCTCTAGGATACGATGAGGCTAAATTGGCATCCATCATGGCATCTTTTATTATCCATAAACCTCGGCAAAGGTCATCATTTACCAAAGCTGCACTAAAGACGCTTGAGAGTATTGGAGAATTGGAACATTTCTTGTTGAAGCATAGGAAGGACTATACAGATCTGCACCGTACAACTGAACAGGAGAGAGATAGCATTGAACATGAAGTTAGTGCCTTTATTAAAACTTGCCAGGAGCAAATTGACGTTCTCAAAAATAGCATTAATGATGAAGAGGCAAACTCAAAAGGTTGGCTTGGCATTGGAGCTAAGTCTAATGCTGACACCATTGCCCACAAACATGGGGTGGTTCTAATTTTGAGTGAGAGACTCCATTCAGTTACTGCTCAGTTTGATCAGCTTAGAGCTATACGGTTCCAGGATGCTATTAATAGAGCTATACCACGAAGAAAACTTAACCGTGCGACCAAAAAAGATACTGCAGAAACCTATAACTCAGGGAATATGGAGCTCAGAGAACCTGGTGAGTTGCGTGGTGAGCCTCTAAGAGTCCAACAACAACAACTCTTGGATGATGAAACACGTGCCCTTCAGGTGGAATTGACTAGTCTTCTAGATGCAGTTCAAGAAACCGAAACAAAGATGGTCGAAATGTCTGCACTAAATCACCTCATGTCCACACATGTTTTGCAGCAAGCTCAGCAAATTGAGCTCCTGTATGATCAGGCTGTTGAAGCTACTAAAAATGTGGAGCTTGGTAACAAAGAACTGTCGCAGGCCATTCAACGGAATTCCAGCAGCAGGACATTTCTTTTGTTGTTTCTTTTTGTGCTTACTTTTTCGATCCTCTTTCTTGATTGGTACAGTTAA 1107 0.4381 MQRKEPWWNKSSMWPRSLSKWGSPLSAIWDANAARFGSRNWGHDSEVKTPTQEKSLMVQMARVRDRTEDFKDAVRQSAHSLGYDEAKLASIMASFIIHKPRQRSSFTKAALKTLESIGELEHFLLKHRKDYTDLHRTTEQERDSIEHEVSAFIKTCQEQIDVLKNSINDEEANSKGWLGIGAKSNADTIAHKHGVVLILSERLHSVTAQFDQLRAIRFQDAINRAIPRRKLNRATKKDTAETYNSGNMELREPGELRGEPLRVQQQQLLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIELLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLDWYS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0725 368 Coils Coil 153 173 - -
Glsi01g0725 368 SUPERFAMILY t-snare proteins 116 332 IPR010989 GO:0016020|GO:0016192
Glsi01g0725 368 Gene3D - 270 365 - -
Glsi01g0725 368 FunFam Syntaxin-81 like 271 365 - -
Glsi01g0725 368 PANTHER SYNTAXIN-18 60 368 - -
Glsi01g0725 368 Pfam SNARE-complex protein Syntaxin-18 N-terminus 65 145 IPR019529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0725 Glsi-ChrGlsi01 11526717 11532597 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0725 124 368 SNARE and Associated Proteins AT1G51740 78.049 2.78e-118 341