Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0722 ATGATTCTCGGGGTTAATGATTGTTCCCATTTGGACAGTACCATCTTTGCCCGTGCATCACTCACTGCAGGTGGAAAACTGAGAGCCAGAAGCAGAGCTTATTCTAAAGTCGCCTCCACGTTTTCTTCTGCGCATGTTGCGGGTGTGCTGTGTGCTTGTGATGCAATATTCCGCGGACGAAGCTTCCTCTGGATTTTGAAGCTTCGAATCTGTCATACAGGTCCTATAAATTCCCTTCACTCAGGTATAGGAAAGATTTCTTCTTTTCAGTTTATGGGTTCTAACTTTTGTCCGTTTTGGCGATCTGGTGTGGCTTTTGAATTTCTTTCAGGATCATCAGTGATGGCATCGGCGTCCCCTTCTCCGAATTCCTCCCCTTCTGCAGTGCCACCAACTTCTGCTGCTACTACACCACCACCCCCTACTTCACCGTCACCTACAAATACTTCTATCACATCACCACCTCCCATTCAAACCTCTGATACCCCTCCTCCTCCGTCTCCCTCTGACCCTTCGGCTACACCTCCTTCTCCACAGGCAGTGCCTTCAACCCCACCTCCTTCTCCATCTCCTTCTCCTCCACCCCCGTCAACTCCGCCGCCATCTTCCCCCCCACCTTCACCACCAGATTCTCCACCAGCGTCTCCCCCACCATCAACTACCACTGCCCCTCCTCCAATTGAAACCTCACCTCCCCCTCCAACTTTATCCCCACCGCCTCCAGTGGCTGCTTCTCGTCCCCAAGCCTCAAAGGTGCCTCCTGTCGCACTTCCACCTCCCCCTCAACCCATCTCATCTTTTCCTCCTCCTCCTCCTCCTCCTCCTCCAGTCAATGTCCCAACACCTCCATCCTCCAGGACTCCTCCGCCACTGGGAAAGCCACCAGAAAGTACTCCTTCGCCTCCTACACTGACGCCCCCTCCATCTGTTTCTCAGTCTCCTCCATCTCCTCCCACAAATGTTCCCCCACCATCCACATTGCCATCGACTCCTCCTTCAATCCCTTCAACCTCTTCACCTCCTCCAAATTCTTTGCCTGCGCCTCCAACTAATGCATCAGTACCTGGGAGCCCAACTGACCCCCATGTCCAACCCCCTATTCCAACAGAGAAACCCACTGCTAAACCAACTAATGATACAGATATATCCACAAATACCTCACCTTCACATTCAGAAGGATTAAATACAGGAGGAGCTGTGGCTATTGGCCTTGTAGTTGGTTTTGTTGTCCTCAGCCTTCTTGTTATGGCCGTGTGGTTTGTACAGAAACGAAAGAAGGAAAAAGGATCAAAAGTTGGTTATACTGTGCCTTCTCCATTTGCCTCTTCCCAAAATTCAGGTACCCTGTTCTTAAGGCCACAGTCTCCAGCTCCCTTTATACATAGTGGCTCTGGTAGTGATTTCGTGTATTCACCATCAGAACCTGGTGGGGTAAGTAATTCAAGATCATGGTTCACATATGAAGAACTTGCCCAAGCAACGGATGGGTTTTCAGCACAAAATCTGTTGGGCGAAGGTGGATTTGGTTGTGTCTACAAAGGCGTTCTCACAGATGGAAGAGAAGTAGCTGTGAAACAGCTTAAAGTGGGAGGTGCCCAAGGGGAGCGTGAATTTAGAGCAGAAGTTGAGATTATTAGCCGAGTACATCATCGCCATCTGGTTTCCTTGGTGGGTTACTGTATATCTGAGCACCAAAGATTGCTGGTCTACGACTATGTTCCTAACAACACCCTTCATTACCATCTTCATGGTGAAGAGAGGACAATTATGGATTGGGCTACCAGAGTCAAGGTGGCAGCTGGTGCAGCTCGTGGGATAGCTTACCTACATGAAGACTGCCATCCACGCATTATTCACCGAGACATTAAGTCATCAAACATCCTTCTTAACAACAACTTTGACGCTCAGGTTTCTGACTTTGGGCTTGCAAAACTGGCATTGGATTCATATACACATGTAACCACACGTGTGATGGGAACCTTTGGGTACATGGCACCAGAGTATGCAATGAGTGGGAAATTGACTGAAAAGTCTGATGTATATTCCTTTGGGGTAGTGCTTTTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCCTCTCAGCCCATTGGTGATGATAGCCTGGTTGAATGGGCTCGACCGTTACTGACTCAAGCACTTAACAATGAAGACTATGAAACATTGGCAGATCCAAGGCTAGAGAAGAACTATGATAGAAATGAAATGTTTCAGATGATCGAGGCTGCTGCAGCCTGTGTACGTCACTCTGCAGCAAAAAGGCCACGAATGAGTCTGGTTGTGAGAGCTTTAGATTCGTTAGATGAATTTTCAGATCTCAGTAATGGAATGAAACCTGGCCAGAGTTCAATCTTTGATTCTTCACAGCAATCTGCACAAATCCGAATGTTTAGGAGGATGGCTTTTGGCAGCCAAGATTACAGTACAAGTTTCTTTAATGATTCTCAGAGTAGCTGGAGGAGTAGAGAGCCGGAGGACTCAAACACCATAATCTCCCAAAATAGATCTTGGGGGTGGAATGTTTGA 2544 0.4815 MILGVNDCSHLDSTIFARASLTAGGKLRARSRAYSKVASTFSSAHVAGVLCACDAIFRGRSFLWILKLRICHTGPINSLHSGIGKISSFQFMGSNFCPFWRSGVAFEFLSGSSVMASASPSPNSSPSAVPPTSAATTPPPPTSPSPTNTSITSPPPIQTSDTPPPPSPSDPSATPPSPQAVPSTPPPSPSPSPPPPSTPPPSSPPPSPPDSPPASPPPSTTTAPPPIETSPPPPTLSPPPPVAASRPQASKVPPVALPPPPQPISSFPPPPPPPPPVNVPTPPSSRTPPPLGKPPESTPSPPTLTPPPSVSQSPPSPPTNVPPPSTLPSTPPSIPSTSSPPPNSLPAPPTNASVPGSPTDPHVQPPIPTEKPTAKPTNDTDISTNTSPSHSEGLNTGGAVAIGLVVGFVVLSLLVMAVWFVQKRKKEKGSKVGYTVPSPFASSQNSGTLFLRPQSPAPFIHSGSGSDFVYSPSEPGGVSNSRSWFTYEELAQATDGFSAQNLLGEGGFGCVYKGVLTDGREVAVKQLKVGGAQGEREFRAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHGEERTIMDWATRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLNNNFDAQVSDFGLAKLALDSYTHVTTRVMGTFGYMAPEYAMSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDDSLVEWARPLLTQALNNEDYETLADPRLEKNYDRNEMFQMIEAAAACVRHSAAKRPRMSLVVRALDSLDEFSDLSNGMKPGQSSIFDSSQQSAQIRMFRRMAFGSQDYSTSFFNDSQSSWRSREPEDSNTIISQNRSWGWNV 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0722 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Glsi01g0722 847 PRINTS Proline rich extensin signature 164 180 - -
Glsi01g0722 847 PRINTS Proline rich extensin signature 134 155 - -
Glsi01g0722 847 PRINTS Proline rich extensin signature 119 131 - -
Glsi01g0722 847 PRINTS Proline rich extensin signature 183 200 - -
Glsi01g0722 847 Gene3D Phosphorylase Kinase; domain 1 473 572 - -
Glsi01g0722 847 FunFam proline-rich receptor-like protein kinase PERK8 573 785 - -
Glsi01g0722 847 SMART serkin_6 497 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g0722 847 FunFam Proline-rich receptor-like protein kinase PERK8 470 572 - -
Glsi01g0722 847 ProSiteProfiles Protein kinase domain profile. 497 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g0722 847 MobiDBLite consensus disorder prediction 373 392 - -
Glsi01g0722 847 Gene3D Transferase(Phosphotransferase) domain 1 573 788 - -
Glsi01g0722 847 MobiDBLite consensus disorder prediction 115 392 - -
Glsi01g0722 847 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Glsi01g0722 847 MobiDBLite consensus disorder prediction 124 372 - -
Glsi01g0722 847 Pfam Protein tyrosine and serine/threonine kinase 500 769 IPR001245 GO:0004672|GO:0006468
Glsi01g0722 847 SUPERFAMILY Protein kinase-like (PK-like) 475 770 IPR011009 -
Glsi01g0722 847 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 408 816 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0722 Glsi-ChrGlsi01 11454849 11460707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0722 370 829 Trihelix Transcription Factor Family AT5G38560 70.701 0.0 690
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Glsi01g0722 PK_Tyr_Ser-Thr 1.8e-47 CL0016