Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0686 ATGAAACCCTCAAGGCAGCAGAAGCATCAGCTCCTGCAACAGAGAGGATGCAGGGCCTTGTGTTGCAGCTGCAATTGCAGGCTTAGTGTTTCTTCCTCAGAGGAAGCAGAGAGCTCTTCTACCTCTGATAGGTTCCCTTCTGTTTCAAGCCTAGCCCATGCCATGGTGCAAGAGAGGCTCGACCAAATGATCAAAGAAAAGATGGAGGCTAGGCAGGTTGAGAGAAGAAGGCAGGTGCAGAGCAGAGAAGGAACCAAGTTCGTTGTGATGGTAGCCATGGAGAAGTGCTCTTACGATCCAAGAGAGGATTTTAGGGAGTCCATGGTGGAGATGATAATGGCAAATCGCCTCCAAGATCCAAAAGATCTTCGTAGTCTATTGAATTACTATGTTTCTGTGAATTCCCAAGAGTACCATAGTCTTATACTTGAAGTTTTTCATGAGGTTTGTACTAATTTGTTCTTATCATGTAGATGCCATTGGTAA 486 0.4527 MKPSRQQKHQLLQQRGCRALCCSCNCRLSVSSSEEAESSSTSDRFPSVSSLAHAMVQERLDQMIKEKMEARQVERRRQVQSREGTKFVVMVAMEKCSYDPREDFRESMVEMIMANRLQDPKDLRSLLNYYVSVNSQEYHSLILEVFHEVCTNLFLSCRCHW 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0686 161 ProSiteProfiles OVATE domain profile. 93 152 IPR006458 -
Glsi01g0686 161 Pfam Transcriptional repressor, ovate 97 154 IPR006458 -
Glsi01g0686 161 NCBIfam uncharacterized plant-specific domain TIGR01568 91 154 IPR006458 -
Glsi01g0686 161 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 12 154 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0686 Glsi-ChrGlsi01 10285898 10286383 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Glsi01g0686 Ovate 1.4e-21 No_clan