Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0681 ATGGCGATTCTGGAGCGGCTGGTGAGGACATCTCGGGCATGGCGTTCAGCTACCTCTCTCAAAACCTTAACTTCTCCACCCGCTTCCTCTCGTCACATTCCCCGCTCTTCCTTTCTCAACACTGCTTTGTCCACTGTGTCTGAGGTTTCAAGTTCAAGGGTTCTACCTGATTCTGCGAGACCAAATTCGCTGTTTCCAGTTGCCTTAGCTGGTATTTTTGGGATCGGAGTTCTAGATACGGTATATGCAGACGCTAATGAGTCTGCAGCTGAAATTCCCTTACCATCATCGTCTCCTTTAAGTTCTGAGGACCAGGATAGAACTACCAAGACTGAACCTCCCTCATCATCAACATCGCCTACAAGTTCTGAGGGTTTGGAAGGAACTGCCAAGAAAGAACGTGAGCGAATTGTACAGTTGCTTAAAAGTAGAGGAATTCGATATGGTTCTTATCCTAACTTCACTGTTGCTGTAAAAGGCCAAAAGGTCAGCATCAGGTTCCAAATTCCTCCTGCTTGTGAAGCTGCACAACTTGTTGCAAATCTTGCTTCACATCTTGGAGTGCAGGCTCAAGAGAATGGTGGTGGCTCATATATGTTATTGCGTGCTTGGGACAGCACAGTTGCTTGGCAATTTGCCCTTAGTCATCCACCAGAGCAAAAGGATATTCAAGGGAACAATCAATCACCAACTTATATGCATTCACGTGATGAAGATCTATGCATACTCATATATTATCCTCTCATCAGCTCAGACAAAGCCGAAATTGAATTCATTAAGCAAGGGAGCTTGAATCCTAAAGAGCTTGATGCTTTCGTATCTGTTTTACAATTAGCTGGAAACAAGTTGGGACAGAGAAGAAGTCTGGAAAGAAGACCAAGGGAAGGAACAGAAAAGGTGCCATCTATGGATAAATCTATTGCTAGTCTTGAGTCAATGGGAGTGAGAGTTTATGGACTCAATGAACCTTGCACAGGTATCTCAAATGGAGAGATATCATGGGACAGCATTGCTGGTTATGATAACCAAAAACGAGAAATAGAAGATACAATACTATTAGCTTTACAAAGTCCTGAAGTATATGATGATATTGCTCGTGGTACTCGTCATAAATACGAGACAAACAGACCTCGAGCTGTTCTCTTTGAGGGTCCACCAGGTACAGGGAAAACTTCTTGTGCTCGTGTTATTGCTAATCAAGCGGGTGTCCCATTGCTATATGTGCCACTAGAGGTTGTCATTTCCAAATATTACAGTGAAAGTGAACACCTTCTAGGGAAAGTTTTTTCACTTGCCAACGAGCTTCCTAAGGGTGCTCTTATTTTTCTAGATGAGGTTGATTCTTTTGCTACTGCTCGTGATAGTGAAATGCATGAAGCTACACGCAGAATATTATCAGTCTTATTGCGACAGATTGATGGATTTGAGCAGGATAAGAGAGTGATTGTCATTGCTGCTACAAATAGAAAGCAAGACCTTGATCCGGCTTTAATCAGTCGTTTTGATGCTATGATCGCTTTTGGCTTACCTGATCATCATAACCGTAAGGAAATAGCAGCCAAATATGCCAAGCATCTTACAAAATCGGAATTAGATGAACTTGCCAGGGTTACTGAAGGTATGTCTGGAAGAGACATTAGAGATATTTGTCTGCAAGCTGAAAGGTCATGGGCGTCAAAGATTATTCGGGGACAAGTATCTAAAGGTCCAGAACAAGCGTGTCTTCCACCGTTACAAGAATATATAGAGAGTGGCACGAATAGGAGGAAAGCCTTGCTCAGTGTTGTAGCAAATCAGAAGCTCCAAAGTTCTACCATCGGGAAAGGAAGACAGATGGATCTAATTTAA 1848 0.4275 MAILERLVRTSRAWRSATSLKTLTSPPASSRHIPRSSFLNTALSTVSEVSSSRVLPDSARPNSLFPVALAGIFGIGVLDTVYADANESAAEIPLPSSSPLSSEDQDRTTKTEPPSSSTSPTSSEGLEGTAKKERERIVQLLKSRGIRYGSYPNFTVAVKGQKVSIRFQIPPACEAAQLVANLASHLGVQAQENGGGSYMLLRAWDSTVAWQFALSHPPEQKDIQGNNQSPTYMHSRDEDLCILIYYPLISSDKAEIEFIKQGSLNPKELDAFVSVLQLAGNKLGQRRSLERRPREGTEKVPSMDKSIASLESMGVRVYGLNEPCTGISNGEISWDSIAGYDNQKREIEDTILLALQSPEVYDDIARGTRHKYETNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEVVISKYYSESEHLLGKVFSLANELPKGALIFLDEVDSFATARDSEMHEATRRILSVLLRQIDGFEQDKRVIVIAATNRKQDLDPALISRFDAMIAFGLPDHHNRKEIAAKYAKHLTKSELDELARVTEGMSGRDIRDICLQAERSWASKIIRGQVSKGPEQACLPPLQEYIESGTNRRKALLSVVANQKLQSSTIGKGRQMDLI 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0681 615 MobiDBLite consensus disorder prediction 91 133 - -
Glsi01g0681 615 MobiDBLite consensus disorder prediction 111 126 - -
Glsi01g0681 615 Gene3D - 510 606 - -
Glsi01g0681 615 Gene3D - 327 509 IPR027417 -
Glsi01g0681 615 CDD RecA-like_protease 365 507 - -
Glsi01g0681 615 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 259 554 - -
Glsi01g0681 615 SMART AAA_5 376 511 IPR003593 GO:0016887
Glsi01g0681 615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 332 553 IPR027417 -
Glsi01g0681 615 Pfam ATPase family associated with various cellular activities (AAA) 380 508 IPR003959 GO:0005524|GO:0016887
Glsi01g0681 615 ProSitePatterns AAA-protein family signature. 481 500 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0681 Glsi-ChrGlsi01 10157378 10164207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0681 376 553 Calmodulin-binding Proteins AT3G56690 38.710 1.85e-27 116