Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0669 ATGACCACGCAGCCTCAGAGAAAACCACCCCATGTTTTCTTGGCCTTTCTTTTCTTTCTTCTTTTCATTCTTAGAGCACAAGCTAACTGCAGGTCTGGTTGCAAGCTTGCTTTAGCTTCATATTACGTCTGGGAAGGGTCCAATCTCACTTACATTAGCGAAATATTTGGCCAGAAAATTTCTGAGATTCTAAAATACAACCCCACTATCCAAAACCCTGATTTTATTAAGAGCCAAACCCGAATCAACGTGCCCTTTACCTGTGAATGCTTGAACGGTGTCTTCTTGGGCCACACTTTCTCTTACACCACCCAACCCGCTGATACCTACAACAAAATTGCTCAGATTGCGTTCTCCAACCTCACAACGGAGGATTGGGTGCACAGGGTGAACGTCTACAAACCTACCCAGATACCCGACGACGTTGGAATTAATGTCACCGTCAATTGCTCCTGTGGCGATAGGCACGTATCGAAGGATTATGGCCTGTTTTTGACGTACCCACTTCGGTCCGGTGAGAACTTGTCGGAGATTTCGGAGGCGGCGGGCTTGCCAGCGGAGCTGATACAGAGGTACAACCCCGCCTCCGATTTCGTTGCTGGGAATGGGCTGGTTTTTGTGCCGGCTAAAGGAATATCGGCGGGAGCCATTGCTGGGATATCTGTAGGAACAGTTGCTGTGGTCTCGCTGTTGGCATTTGTTCTGTATTTTAGTCTATATAGAAGAAAGAAGGTGGCAGAGGTATCCCTTCTCCCAGGAGCTTCTGAAGATGAGTATATTCAGAATGGACATGGTTCTGGAAGTAACTTGGAGAAGGTGTCCGAATCTGCTGTTGAAGTTGCCTCTCCAAGGTTGACGGGTATTACAGTAGACAAGTCAGTGGAGTTTTCTTATGAAGAGCTCGCCAAAGCGACCAACGGCTTTAGCGTGGATAATAAGATCGGGCAAGGTGGCTTTGGTTCTGTTTTCTATGCTAAGCTTCGAGATGAGAAAGCTGCGATTAAGAAGATGGATATGCAAGCATCGAAAGAATTCCTTGCTGAACTGAAAGTTCTAACACACGTCCACCACTTGAACTTGGTACGCTTAATAGGATATTGTGTTGAGAGCTCCTTATTTTTGGTGTATGAATACATTGAGAATGGCAATTTAAGTCAACATTTACGTGGCTCAGGGAGGAAACCATTATCATGGTTAGCAAGAGTTCAAATTGCCCTGGACGCAGCAAGAGGACTTGAATACATCCACGAGCATACAGTTCCTGTGTACATCCATCGGGATATTAAATCCGCTAACATTTTGATTGATAAAAACTTTCGCGGAAAGGTTGCTGATTTTGGTCTGACAAAACTGACTGGATATGGAAGTTCTTCATTGCAAACATGTCTTGTTGGTACATTTGGCTACATGCCTCCCGAATATGCACAATACGGCGACGTTTCCCCTAAAATAGATGTATATGCTTATGGAGTAGTCCTCTACGAACTAATATCCGCCAAGGAAGCCATTATCAAGACCAACGAGCTTGAGAATGAATCAAAGGGACTAGTTGCCCTGTTTGAAGAGGTTCTCAAGCAGCCAGATCCAAAAGATGATCTTCGAAAACTTGTTGACCCTAGGCTTGGTGATGACTACCCTTTTGACTCAGTATATAAGATGTCTCAGCTTGCGAAAGCTTGCACACATGAAAATCCTCAACTGAGGCCAAGCATGAGATCAATTGTAGTTGCATTAATGATACTTTCTTCTACAACTGAGGACTGGGATGTTGGCTCCTTCTATGAAAACCAGGCCGTGATGCATCTAATGTCAGGAAGGCACATCAATCCTATAGATAATATCGACCTAATTAGCAATACCTTGAGAAACAATGGACGACAAGTAGAGGAGATTGATGCTAGGAACGATGAATATGAAGATGAGCAGAAGAATGAAGATGAGGATGAGAATGAGAATGAACACGAAAACTAG 1971 0.4424 MTTQPQRKPPHVFLAFLFFLLFILRAQANCRSGCKLALASYYVWEGSNLTYISEIFGQKISEILKYNPTIQNPDFIKSQTRINVPFTCECLNGVFLGHTFSYTTQPADTYNKIAQIAFSNLTTEDWVHRVNVYKPTQIPDDVGINVTVNCSCGDRHVSKDYGLFLTYPLRSGENLSEISEAAGLPAELIQRYNPASDFVAGNGLVFVPAKGISAGAIAGISVGTVAVVSLLAFVLYFSLYRRKKVAEVSLLPGASEDEYIQNGHGSGSNLEKVSESAVEVASPRLTGITVDKSVEFSYEELAKATNGFSVDNKIGQGGFGSVFYAKLRDEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVESSLFLVYEYIENGNLSQHLRGSGRKPLSWLARVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTGYGSSSLQTCLVGTFGYMPPEYAQYGDVSPKIDVYAYGVVLYELISAKEAIIKTNELENESKGLVALFEEVLKQPDPKDDLRKLVDPRLGDDYPFDSVYKMSQLAKACTHENPQLRPSMRSIVVALMILSSTTEDWDVGSFYENQAVMHLMSGRHINPIDNIDLISNTLRNNGRQVEEIDARNDEYEDEQKNEDEDENENEHEN 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0669 656 Gene3D Phosphorylase Kinase; domain 1 293 378 - -
Glsi01g0669 656 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Glsi01g0669 656 FunFam LysM receptor kinase 2 287 378 - -
Glsi01g0669 656 Gene3D LysM domain 31 90 IPR036779 -
Glsi01g0669 656 SUPERFAMILY Protein kinase-like (PK-like) 287 580 IPR011009 -
Glsi01g0669 656 Gene3D Transferase(Phosphotransferase) domain 1 379 588 - -
Glsi01g0669 656 ProSiteProfiles Protein kinase domain profile. 308 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g0669 656 MobiDBLite consensus disorder prediction 634 656 - -
Glsi01g0669 656 Pfam Protein kinase domain 309 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g0669 656 ProSiteProfiles LysM domain profile. 39 84 IPR018392 -
Glsi01g0669 656 FunFam PTI1-like tyrosine-protein kinase 3 379 592 - -
Glsi01g0669 656 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 14 596 IPR044812 GO:0019199|GO:0045087
Glsi01g0669 656 MobiDBLite consensus disorder prediction 627 656 - -
Glsi01g0669 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Glsi01g0669 656 Coils Coil 621 656 - -
Glsi01g0669 656 SMART serkin_6 308 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0669 Glsi-ChrGlsi01 9865925 9879289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0669 17 606 Receptor kinase-like Gene Family AT3G21630 55.302 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Glsi01g0669 Pkinase 4.7e-46 CL0016