Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0660 ATGGATAAAGGATGGGGTCTTACCCTTGATTCTTCTTTCCCTACTTCCCTCGGATTTTTCCCATCATCCAAACACCCTCCCCCTAGGCCTGGTTTGGGATTTCCACTAAATCTTAGCCGCACCATGGAATCGTCTGATGGGATTGTTGACTTCTTCTCGGATAGAAACAAGTTATTAGCACAAACTGCAGATGAGGATCATCCTGATGTTAAACCCCATATCAGTATCAACCAGGGAAATTCTCAGATCCAACCAGTTGCCAAATCTAATTTGGATATAAATATTGACTTACAACTCCTCACGGGTAATGCTGGAAGTGATCCATCTACGGTGGATGATGGAATTTCGTCTGATGGTAAACATAAGCAAGTCCCTGAGCTGGCACAATTGGAAGAGGAGCTTCTGCGCATGAATGCAGAAAACCAAAAGCTGAAAGAGATTCTCAGCCAAGTGAGCAGTAATTACACCGCCTTGCGAATGCAACTCTCGGCAATAATGCAACAGCGACATAATCAACTTGCCCAGATCAAAGAACACGATGATCAGGTTGTTGAAGGAAAAGCTGAGGAGAAAAAACAGGTACCGAGACAGTTTCTTGAGGTAGGTGCTAGTGGTGAAGCTGAAGTTGATGAAGTATCAAATTCTTTTTCGGAGGAGAGAACTCCATCGAGTTCGCCTCCGAACAATAATGTTGAGGTTGGATCAAGGAACTACGTGAAAAACAATGGTAAAAGTCATGAGATGGGTGGGGAAGAGAGACCAGAATCAGAATCACAAGGTTGGGGTCCTAATAAGCTTCAGAAACTGAACCCTTCAAACCCCACCACGGACCAATCTACCACGGAAGCTAATATGAAAAAAGCTCGTGTCGCAGTTCGTGCGAGATCAGAAGCTCCCATGATTAGTGATGGGTGCCAATGGCGAAAATATGGACAAAAAATGGCCAAGGGAAACCCTTGCCCTCGTGCTTATTATAGATGCACTATGGCACTTGGTTGCCCAGTTCGCAAACAAGTTCAGAGATGTGCAGAAGATAGAACCATTTTGATAACTACTTATGAAGGAAGCCATAACCATCCACTACCACCTGCAGCTATGGCCATGGCATCAACAACCACAGCTGCTGTTAGCATGTTGCTTTCTGGGCCAATGTCTAGTGGCGATCACGGGGTAATGATGAATCCCAATTTGGTAGCAAGAGCCATTCTTCCGGCCTGCTCTTCTAGCATGGCAACTCTTTCTGCTTCAGCACCATTTCCCACTGTGACATTGGACCTCACTCACAATAACCCAAACCCATTAATGCAATTCCAAAGACCTCCTCCTTCTGAAGCTCCATTTCAGGTACCATATTCTGGGCAGCCTCAGAACTTTGGCCCTCAGGCATTTGCACAAGCGCTTTATAATCAATCCAAGTTTTCTGGCCTTCAGCTGTCTGCTGACACAGTAAGCACCGCCACCGCGGCGATCACCGCCGACCCTAACTTCACGGCAGCTCTTGCTGCGGCCATCTCCTCCATAATCGGCGGTGCTCATCCGGACAACAACAACAATCACAGTAGCAGCAGCAATCCCAATATCATCAACAGTTGTACAATAAGCAGCTTTTCAGGGAATTAA 1620 0.4611 MDKGWGLTLDSSFPTSLGFFPSSKHPPPRPGLGFPLNLSRTMESSDGIVDFFSDRNKLLAQTADEDHPDVKPHISINQGNSQIQPVAKSNLDINIDLQLLTGNAGSDPSTVDDGISSDGKHKQVPELAQLEEELLRMNAENQKLKEILSQVSSNYTALRMQLSAIMQQRHNQLAQIKEHDDQVVEGKAEEKKQVPRQFLEVGASGEAEVDEVSNSFSEERTPSSSPPNNNVEVGSRNYVKNNGKSHEMGGEERPESESQGWGPNKLQKLNPSNPTTDQSTTEANMKKARVAVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMALGCPVRKQVQRCAEDRTILITTYEGSHNHPLPPAAMAMASTTTAAVSMLLSGPMSSGDHGVMMNPNLVARAILPACSSSMATLSASAPFPTVTLDLTHNNPNPLMQFQRPPPSEAPFQVPYSGQPQNFGPQAFAQALYNQSKFSGLQLSADTVSTATAAITADPNFTAALAAAISSIIGGAHPDNNNNHSSSSNPNIINSCTISSFSGN 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0660 539 SUPERFAMILY WRKY DNA-binding domain 294 362 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi01g0660 539 Gene3D WRKY domain 286 363 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi01g0660 539 MobiDBLite consensus disorder prediction 260 285 - -
Glsi01g0660 539 FunFam probable WRKY transcription factor 31 286 363 - -
Glsi01g0660 539 ProSiteProfiles WRKY domain profile. 296 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi01g0660 539 Coils Coil 127 154 - -
Glsi01g0660 539 MobiDBLite consensus disorder prediction 102 121 - -
Glsi01g0660 539 MobiDBLite consensus disorder prediction 216 242 - -
Glsi01g0660 539 SMART WRKY_cls 301 361 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi01g0660 539 Pfam WRKY DNA -binding domain 303 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi01g0660 539 MobiDBLite consensus disorder prediction 178 285 - -
Glsi01g0660 539 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 95 522 IPR044810 GO:0003700
Glsi01g0660 539 MobiDBLite consensus disorder prediction 178 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0660 Glsi-ChrGlsi01 9581872 9584373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0660 1 519 WRKY Transcription Factor Family AT1G62300 48.154 1.77e-141 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi01g0660 WRKY 3.6e-24 CL0274