Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0615 ATGAGCAACTCAAATCGTACCAGCAATGTTAATGGCCAATATGCCGAAGAGATAGAAGCTGGGAATACTAATCTGGAATTCTCTGAAGATGAGAAGGCTCTCATTGCTAGGATGTTTAGATTGGTTGGAGAGAGGTGGTCTCTGATTGCTGGGAGAATCCCCGGAAGAACTGCAGAAGAGATTGAGAAGTTTTGGACTTCAAAGTCCTCTTCATGA 216 0.4352 MSNSNRTSNVNGQYAEEIEAGNTNLEFSEDEKALIARMFRLVGERWSLIAGRIPGRTAEEIEKFWTSKSSS 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0615 71 Gene3D - 26 68 - -
Glsi01g0615 71 FunFam MYB-like transcription factor 26 68 - -
Glsi01g0615 71 CDD SANT 26 65 IPR001005 -
Glsi01g0615 71 SMART sant 23 71 IPR001005 -
Glsi01g0615 71 ProSiteProfiles Myb-like domain profile. 27 69 IPR001005 -
Glsi01g0615 71 Pfam Myb-like DNA-binding domain 26 65 IPR001005 -
Glsi01g0615 71 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 26 68 - -
Glsi01g0615 71 SUPERFAMILY Homeodomain-like 26 67 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0615 Glsi-ChrGlsi01 8403262 8404668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0615 27 70 MYB Transcription Factor Family AT5G14750 47.727 2.73e-12 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi01g0615 Myb_DNA-binding 2.5e-08 CL0123