Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0593 ATGGGCTGGTTATCATGCTGCAATTGCAGGTCAGAAGACGTTCAAGAAGAACCTTCCGGGGAATTTACTGAATGTAGGTCAACATACAAGTCAGAAACATTCAAATCAATCGTGGCGAATATGTCACTGAAAACAGGTAGCAGCAGGCACAGACATATAAACGCAGCGATACAAAAACATGGAACTGTGAAAAACGAAGCTAAAATTTTTACATACCAAGAACTCGCAGCTGCAACTCACGACTTCAATCATAGTTGCCAGATAGGCGAAGGAGGATTTGGGAAGGTCTACAAAGGATACTTAAAAAGCATGGACCAAACTATAGCTGTGAAGCAACTGAATAGGAAAGGGTGTCAAGGAAATCGAGAATTTCTTGCAGAGATTTTGATGCTAAGCTTGGTGGAGCACGAAAACTTGGTCAAGTTGCTTGGTTACTGTGTTGAAGACGACCAAAGGATTTTAGCTTATGAGTTCATGGCAAATGGGAGTCTAGAAAATCACCTTCTAGACCCAGATACAATTAAGGAGCCATTGGACTGGTATACTAGGATGAAAATAGCAGAGGGAGCAGCCAGAGGGCTTGAATATCTGCATGACACAGCTGATCCACCAGTGATATACCGTGATTTCAAGGCATCAAATATACTATTAGATGAGGATTTCAATCCAAAGCTTTCTGATTTTGGATTGGCCAAGATGGGTCCCACCGGAGGGAAGGAGTATGTGTCCTCAAGGGTGATGGGAACCTATGGCTACTGTGCACCTGAGTATGCTGCCACAGGTCAACTAACAGCAAAGTCAGATGTTTATAGCTTCGGTGTTGTGTTTCTGGAAATGATCACTGGCAGAAGAGTCATTGACACTGCAAAAGCACCAGAGGAGCAAAACCTCATTGAATGGGCAAAGCCTTTATTTAAGGACAGGAATATGTTTACTTCAATGGCTGACCCTTTGCTTAAGAACAACTTCCCTGTGAAGAGCCTATTCCAAGCTCTTGCTGTGGCAGCAATGTGCCTCCAAGAGGAAGCTGAGACAAGACCGTTTATGGGTGATGTAGTGGAAGCTCTTGAGCATCTATCAAAACCTCAAAATGGAGAAGTAGAAACCGCGGCTGAGCCCATAAAATGTGCTGGACATGTTGAATCATTTAGAGCTGGAAGTGCACTTGAAGACCAAGAGATCTAG 1185 0.4354 MGWLSCCNCRSEDVQEEPSGEFTECRSTYKSETFKSIVANMSLKTGSSRHRHINAAIQKHGTVKNEAKIFTYQELAAATHDFNHSCQIGEGGFGKVYKGYLKSMDQTIAVKQLNRKGCQGNREFLAEILMLSLVEHENLVKLLGYCVEDDQRILAYEFMANGSLENHLLDPDTIKEPLDWYTRMKIAEGAARGLEYLHDTADPPVIYRDFKASNILLDEDFNPKLSDFGLAKMGPTGGKEYVSSRVMGTYGYCAPEYAATGQLTAKSDVYSFGVVFLEMITGRRVIDTAKAPEEQNLIEWAKPLFKDRNMFTSMADPLLKNNFPVKSLFQALAVAAMCLQEEAETRPFMGDVVEALEHLSKPQNGEVETAAEPIKCAGHVESFRAGSALEDQEI 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0593 394 Pfam Protein kinase domain 85 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g0593 394 PANTHER OS07G0668900 PROTEIN 30 365 - -
Glsi01g0593 394 FunFam Serine/threonine-protein kinase PBS1 159 373 - -
Glsi01g0593 394 SUPERFAMILY Protein kinase-like (PK-like) 68 363 IPR011009 -
Glsi01g0593 394 CDD STKc_IRAK 88 359 - -
Glsi01g0593 394 Gene3D Transferase(Phosphotransferase) domain 1 159 379 - -
Glsi01g0593 394 ProSiteProfiles Protein kinase domain profile. 82 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g0593 394 Gene3D Phosphorylase Kinase; domain 1 42 158 - -
Glsi01g0593 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Glsi01g0593 394 FunFam Serine/threonine-protein kinase CDL1-like 53 158 - -
Glsi01g0593 394 ProSitePatterns Protein kinases ATP-binding region signature. 88 111 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0593 Glsi-ChrGlsi01 7633564 7636007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0593 67 367 Glycoside Hydrolase AT3G07070 64.356 3.96e-143 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Glsi01g0593 Pkinase 1.5e-46 CL0016