Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0587 ATGATCTCTTCAATCAAACACACTGCCTCGTCTCTGAGCTGCTCTGCTTTCTCAAGCAGAAAGCTTTCTGTTCCAAGGCCTCAATTTTACACATTACCCACAATTCAAAATGCTCAAAAAAACTCAGATTCCTCCCTCTCTTCCCAGAAACCTCTTTACATCGCATCGGCCGAGAACTTCACATTGCTGACAAAACCGAGGAAAAGGGTTACAGAGTGCCAAGCCTATGAGGCTGATAGGTCAAGACCACTTGAGATTAACATTGAGCTGCCTAACGATCAGGCTCGGGTAGAGGCAGCTCAAAGGCTCAAGATTGGCTTGTATTTTGCTACCTGGTGGGCTTTGAATGTGGTGTTCAACATATACAACAAGAAGGTTTTGAATGCATTTCCTTACCCGTGGCTCACTTCGACTTTGTCTCTGGCTGCTGGCTCCCTCATGATGTTAATCTCATGGGCCACGAGGATTGCTGATGCCCCCAAAGTTGATTTGGATTTTTGGAAGGCCCTGCTTCCTGTTGCGGTAGCACACACAATTGGGCATGTTGCAGCAACTGTGAGTATGTCAAAAGTAGCAGTTTCATTCACCCACATTATCAAAAGTGGAGAGCCAGCTTTCAGTGTTCTGGTATCAAGGTTCTTGCTTGGAGAAGCATTCCCTTTGCCAGTTTACCTGTCACTGGTACCAATTATTGGTGGTTGTTCACTTGCTGCTCTGACCGAGCTCAATTTCAATATGACTGGTTTTATGGGAGCTATGATCTCAAATTTGGCATTCGTATTCCGGAATATATTCTCAAAGAAGGGGATGAAGGGAATGTCTGTTAGCGGAATGAACTACTATGCTTGTCTTTCTATGTTGTCTCTATTAATTCTCACACCTTTTGCCATAGCCGTGGAAGGCCCCAAAATGTGGGCTGCTGGCTGGCAAACAGCCATGTCTCAGATCGGTCCCAATTTCGTCTGGTGGGTAGCTGCACAGAGTATCTTCTACCACTTGTACAATCAAGTCTCGTACATGTCTCTTGATCAGATCTCTCCCTTGACATTCAGTGTCGGGAACACGATGAAGAGAATCTCTGTAATTGTCTCTTCCATCCTTATCTTCCACACGCCAGTTCAACCCATCAATGCCCTCGGCGCTGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGCCAAACAGTGA 1191 0.4584 MISSIKHTASSLSCSAFSSRKLSVPRPQFYTLPTIQNAQKNSDSSLSSQKPLYIASAENFTLLTKPRKRVTECQAYEADRSRPLEINIELPNDQARVEAAQRLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRIADAPKVDLDFWKALLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPLPVYLSLVPIIGGCSLAALTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSMLSLLILTPFAIAVEGPKMWAAGWQTAMSQIGPNFVWWVAAQSIFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSILIFHTPVQPINALGAAIAILGTFLYSQAKQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0587 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 295 393 - -
Glsi01g0587 396 Pfam Triose-phosphate Transporter family 103 392 IPR004853 -
Glsi01g0587 396 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 103 395 IPR004696 GO:0016020|GO:0022857|GO:0055085
Glsi01g0587 396 PANTHER SOLUTE CARRIER FAMILY 35 104 395 - -
Glsi01g0587 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0587 Glsi-ChrGlsi01 7519514 7521870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0587 19 396 Antiporters AT1G61800 78.740 0.0 599