Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0574 ATGGCGGTGCGAAGCTCGTCGAGAGTGTCATCGATGGTCTCCAAGCAATCATGGAGAGCGGTTTTTTCATGCTCAGTTAAGCCCGTTCTAGTCGTAAGCTTCTGGACTGTGAATTGGTTATGTTCGACGGCTCTAGTGGTTATATTCAACGACAGTTCTATGAAGTCTTTGTGGGTGGAAATTTGTTGGGTAATTCCGAGTTCGGAGGAAATGGCTGAGAAACAGAGTTCAGGGTACAATGTGTTACTACAAGCGGATTTGATGACGGCGTGGGATGGGGTAGACCCGACATTGTCGTCGGCGCCGGAGCTTTTGTTGCGGGAGCTTACTTCGGCGACAATGCAAATGATGGCTGCGACGAGAAAGAGAGAGGCAAAGAGAGTTAAGAAGAGTTTTTTGTTCTTCTTGGGCAACAAGGAAATGAGTTTGCGGTTGCCGGAATCTGTGATTCCGGCGAAGAATTGTTTTATCTTGCTCATTGGAAACACAGAAGAGACAAAGGGAAAGAGAATTGAATTGGGGAGGGGTAAAGAAAAGGAAAAGGGCGAAGAGAGTTTTATAGAGAATGTGATTGTGAGTGCAGTGTTGACAAGCAGAGCCATTTTCCAGAGAATGAAGAACTACACCATCTATGCTGTTTCTATAACAATCAGAATCGTGCTGGGGTTCATGCTGCTTGCTCTTATCTGGAAATTTGATTTCTCACCTTTCATGGTTTTGATCATTGCCATACTAAATGATGGGACTATCATGACCATTTCCAAGGACAGGGTGAAGCCATCTCCTACTCCAGATTCCTGGAAGCTCAATGATATTTTCGCCACCGGCATAGTGCTTGGCTCCTACCTGGCTGTCATGACTGTTGTCTTCTTCTGGGCTGCTCATGCATCCGATTTCTTCTCAGTAAGAATTTAA 915 0.4536 MAVRSSSRVSSMVSKQSWRAVFSCSVKPVLVVSFWTVNWLCSTALVVIFNDSSMKSLWVEICWVIPSSEEMAEKQSSGYNVLLQADLMTAWDGVDPTLSSAPELLLRELTSATMQMMAATRKREAKRVKKSFLFFLGNKEMSLRLPESVIPAKNCFILLIGNTEETKGKRIELGRGKEKEKGEESFIENVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLNDIFATGIVLGSYLAVMTVVFFWAAHASDFFSVRI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0574 304 PANTHER CALCIUM-TRANSPORTING ATPASE 189 297 - -
Glsi01g0574 304 Gene3D - 183 304 - -
Glsi01g0574 304 SUPERFAMILY Calcium ATPase, transmembrane domain M 66 300 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0574 Glsi-ChrGlsi01 7139559 7140572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0574 189 303 Primary Pumps ATPases AT1G80660 88.696 6.65e-64 214