Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0569 ATGGTAACTGCCCAAAATCGACTCTACCCAACGCAAAACTCAGGGACTTCGATTCAATTATGTCAGATAGAACCAACCGAGCAACTTGCGCAAGCCATAATTTCATTCCCTACCTATCTGGGTCGTCCATGGGGGAACTTCTCTAGGACCGTTGTAATGGAGTCCAACATTGGTGATCACATTATCCCAGCTGGATGGTCCGTTTGGTCTAGTGATGCAAATCCTATGTTGAAGACAAGAACATTGTATTATGGAGAGTACAGAAACTATGGACCTGGGGCTGGTCTGAGAGGGAGAGTGAACTGGACTGGTTTCCATAAAATTACTAACGAGGCAGAGGCCATGCAGTTCACAGTAGCAAAGCTCATTAATGGTGGGGAATGGCTGAGGAATACTGGAGTGGCCTTCATTGAAGGGCTGTAG 423 0.4657 MVTAQNRLYPTQNSGTSIQLCQIEPTEQLAQAIISFPTYLGRPWGNFSRTVVMESNIGDHIIPAGWSVWSSDANPMLKTRTLYYGEYRNYGPGAGLRGRVNWTGFHKITNEAEAMQFTVAKLINGGEWLRNTGVAFIEGL 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0569 140 Pfam Pectinesterase 1 125 IPR000070 GO:0030599|GO:0042545
Glsi01g0569 140 SUPERFAMILY Pectin lyase-like 2 139 IPR011050 -
Glsi01g0569 140 Gene3D - 1 140 IPR012334 -
Glsi01g0569 140 PANTHER PECTINESTERASE 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0569 Glsi-ChrGlsi01 7026901 7027323 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0569 1 140 Carbohydrate Esterase AT1G11580 52.857 1.63e-41 143