Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0567 ATGGAGTCCAGCATCGGCGATCACATTATCCCAGCTGGATGGTCCGTTTGGTCCAGTGATGCAAATCCTATGTTGAAGACAAGAACATTGTATTATGGAGAGTACAGAAACTATGGACCTGGGGCTGGTCTGAGAGGGAGAGTGAACTGGACTGGTTTCCATAAAATTATTAACGAGGCAGAGGCCATGCAGTTCACAGTAGCAAAGCTCATTAATGGTGGGGAATGGCTGAGGTTGTATTATTTTAGTGCGATGCTGTCTGTTGGACTTGGACCTAATGACTTGGTCTGTTCCTGGGTCCAGAAATAA 309 0.4595 MESSIGDHIIPAGWSVWSSDANPMLKTRTLYYGEYRNYGPGAGLRGRVNWTGFHKIINEAEAMQFTVAKLINGGEWLRLYYFSAMLSVGLGPNDLVCSWVQK 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0567 102 PANTHER PECTINESTERASE 1 78 - -
Glsi01g0567 102 SUPERFAMILY Pectin lyase-like 1 83 IPR011050 -
Glsi01g0567 102 Gene3D - 1 87 IPR012334 -
Glsi01g0567 102 Pfam Pectinesterase 1 73 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0567 Glsi-ChrGlsi01 6992508 6992929 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0567 1 78 Carbohydrate Esterase AT1G11580 55.128 3.29e-21 84.7