Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0533 ATGGCAGCCTTTTCTATGTTAAAGATCAGGGATTTTGTTTTTACAGGAAAGAACAAGACATCTCAAACAGCCATAGCCATAGTTGTGCCTATTGTTGCCTTTGTTGTTCTGGTTAACCTTATTTGGATCTATGTGAGAGTGAGGAAGCGAAGGAAACATCGTCAAATTGTTGGCCAACTTCAGGGTAGGCTCTCCAATGGACAAAAGATCGCAGTAAAAAGGTTTTCTAGGGATTCTGGGCAAGGAGACATTGAATTCAAGAATGAAGTACTATTAATGGCCAAGCTTCAACATCGAAATTTAGTTAGGCTCCTTGGTTTCTGTTTGAAACAAAAAGAACGGCTACTAGTCTATGAGCTTCTTCCCAATAAAAGTCTTGATTACTTCATATTTGCATTGTGGTCTCTCTTCTGCTCGGTTTCTTCGTGGGTTCCAATCTCATCTCAGCTTCGTTTGTTTGTGCTTCTTCTTCGTGGATTGCATCTCAGCTCAGATCGGTTTCTTCACTCTCCTTCGCGGGTTCCATCTCAGCTCAGCTCGGTGCCTTCATTCTCCTTCACGGTGAATATCTCAGCTCAGCTCGGTCCATCTCATCATCGTCTTTTTCTGGTTGCTCTTGTTCGTGGGTTCCATCAAGCATCCGTGAGAATCGTCCTCAAGGTTGTTGGAGACCGTGAAGGAGCAGTTTTTGTTGGCTTGGTTGAAGCACCTCTAAGGCCATGCAACAAGAGAAAATACCAGGGAACAAATAATACATTTGTTTTCACAAATACCCCTGGTCATCCTGTTATATATCGTCCAACAGGTGTTATGGAGATATCCTTCTTAAAGATGCTAGTTAATGGCATATCTTCATTTTTTCATTTATCATTTTCTGGAAACTTGAACTCAGAACTTGTCTCAAAGTATTACCAAAAGGCAGAGGAGACACTTAAAGAACTTAACTTTGATTATGCAGGTCTTCCTGTTTATTTCATTGAGCATCAAGGGACTGCACCTGCTTTAGAATTGGCATCATGTGTGGTCGGGACTGGTTGTCAAAGTTTGGGTACATCAATTGGTCATTGCAAGCTTGAAAACTTCAATACAAATTGGTGGGGTGAAAGGGTAATGGGATTTAGCTGGCACTTGCTTGGAAGTCAGCATTCCACAGATAGCATTGGTTCTAATATTCACTCTGCTGGAGGAGCATATAACTACAAAGGATGTAGTCCTGACATACCAAGTTCAAACATTCTGAATGATGCATGTAGAAGGCATGCATATACCATGAAGCATTGCAGGACTGATGTTTCCAATGCATTGTCGACTGCTGCATGGGTCAGATTTCCTTACCCTTTACAGTGGGGTATCCCTATTTTCCATTATAAGACTTCCATAATCATGATCATAGTGTCACTGGTTGCCTCTGTGGATTCAGTCGGAACGTATCATACTGCATCTCTGCGAGTTAATTTGAGGTCTCCAACTCCAGGGGTTGTGAGCCAAGGAATTGCATTGGAGGGTTTCTGTAGTATATTGGCTGGTCTTTGGGGCTCAGGTACTGGCTCAACGACTTTGACAGAAAATGTGCATACAATTGAAATAACAAAGGTGGCAAATCAGAAGGTAGTGGAACTTGGAGCAGCTTTTTTGATCTTGAAAAGTGGGTGCCCTTCTTGCCTCCATTCCACATGCCTTGGCTGCTTCTGTACTGTGCTTCATATGAGCCCTAATTACAGCATTGGGCCTTTCAACTTTACACCTGCTTCTAGTCTGATACTACCAAGTTATCTGGTTCCTTACGCTGCAGCATCTAGTGGACCATTCCAATTAGGCCTTAAACAACTCGATTTTGCAATCAATGCTGTTATGTCCATGAACATGGTGGTTACACTCTTGGTGGCATTCATACTGGATAACACTCTCCCAGGAAGTCGACAAGAACGAGGAGTCTATATATGGTCGCAATCTGAAGACATTGCCGCTGATCCATCCTTGCCATCAGAATATTCCCTGCCCAGAAAAGAAGTTGTTTTTGTTTTGGAGGAAAGCATATGGGAGAAAGCCATAGATTGGAGCTTAGAACATATTGCAGCAAATGAAGGAAAAAAAGAAGATTTATAG 2106 0.4226 MAAFSMLKIRDFVFTGKNKTSQTAIAIVVPIVAFVVLVNLIWIYVRVRKRRKHRQIVGQLQGRLSNGQKIAVKRFSRDSGQGDIEFKNEVLLMAKLQHRNLVRLLGFCLKQKERLLVYELLPNKSLDYFIFALWSLFCSVSSWVPISSQLRLFVLLLRGLHLSSDRFLHSPSRVPSQLSSVPSFSFTVNISAQLGPSHHRLFLVALVRGFHQASVRIVLKVVGDREGAVFVGLVEAPLRPCNKRKYQGTNNTFVFTNTPGHPVIYRPTGVMEISFLKMLVNGISSFFHLSFSGNLNSELVSKYYQKAEETLKELNFDYAGLPVYFIEHQGTAPALELASCVVGTGCQSLGTSIGHCKLENFNTNWWGERVMGFSWHLLGSQHSTDSIGSNIHSAGGAYNYKGCSPDIPSSNILNDACRRHAYTMKHCRTDVSNALSTAAWVRFPYPLQWGIPIFHYKTSIIMIIVSLVASVDSVGTYHTASLRVNLRSPTPGVVSQGIALEGFCSILAGLWGSGTGSTTLTENVHTIEITKVANQKVVELGAAFLILKSGCPSCLHSTCLGCFCTVLHMSPNYSIGPFNFTPASSLILPSYLVPYAAASSGPFQLGLKQLDFAINAVMSMNMVVTLLVAFILDNTLPGSRQERGVYIWSQSEDIAADPSLPSEYSLPRKEVVFVLEESIWEKAIDWSLEHIAANEGKKEDL 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0533 701 SUPERFAMILY Protein kinase-like (PK-like) 62 140 IPR011009 -
Glsi01g0533 701 Gene3D Phosphorylase Kinase; domain 1 49 120 - -
Glsi01g0533 701 FunFam Uncharacterized protein 54 120 - -
Glsi01g0533 701 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 392 669 - -
Glsi01g0533 701 Pfam Permease family 428 549 IPR006043 GO:0016020|GO:0022857|GO:0055085
Glsi01g0533 701 Pfam Protein tyrosine and serine/threonine kinase 65 131 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0533 Glsi-ChrGlsi01 5979681 5993052 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0533 393 669 Organic Solute Cotransporters AT4G38050 57.643 2.61e-116 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi01g0533 Xan_ur_permease 2.3e-22 CL0062