Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0531 ATGTATACAGGAAAAGGAGATTCTGGTTCTCAAAACATTATTGTCATTGTTATTCCCATTGTCGTTATAATGATGCTTTCTGGTTTGGGCTGCTGTTTCCTATGGAGAAAAGCTAGGAAGAGTAACAAGGCTATTCTCCAAGAAAACTATTCACAAAAACGTAGAGAATTTAATTGGTCTCTACGTTTCAAAATTTTAAAAGGAATTGCTCGAGGACTTCTTTATCTACATGAACTTTCTCGACTCAAAGTTATACATCGTGATCTCAAACCTAACAATATTTTATTAGATAACAACATGAATCCAAAAATATCAGATTTTGGCATGGCAAGAATGGTTTCCATAGATGAAGACCAAGGAAGTACTAATCGAATTGTTGGAACATTGTGA 390 0.341 MYTGKGDSGSQNIIVIVIPIVVIMMLSGLGCCFLWRKARKSNKAILQENYSQKRREFNWSLRFKILKGIARGLLYLHELSRLKVIHRDLKPNNILLDNNMNPKISDFGMARMVSIDEDQGSTNRIVGTL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0531 129 Pfam Protein kinase domain 53 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g0531 129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672|GO:0006468
Glsi01g0531 129 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 52 129 - -
Glsi01g0531 129 Gene3D Transferase(Phosphotransferase) domain 1 38 129 - -
Glsi01g0531 129 ProSiteProfiles Protein kinase domain profile. 1 129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g0531 129 SUPERFAMILY Protein kinase-like (PK-like) 51 128 IPR011009 -
Glsi01g0531 129 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Glsi01g0531 129 FunFam Os07g0541700 protein 38 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0531 Glsi-ChrGlsi01 5869967 5871022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0531 3 128 Receptor kinase-like Gene Family AT4G23130 43.382 5.21e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi01g0531 Pkinase 1.9e-16 CL0016