Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0529 ATGGCAGCCTTTTCTCTGTTAAAGATCAGGAATTTTGTTTTTGCAGGAAAGAACAAGACATCACAAACAGTCATAGCCATAGTTGTGCCTATTGCTGCCTTTGTTGTTCTGCTTAACCTTATTTGGATCTATGTGAGACTGAGGAAGCGAAGGAAACACCTTCAAAGTGAACTTGAAGCTGATAAGGAAACTGAACTTGCTGATTCAATACAATTCGACTTTGACACCATCAAAGTTGCTACTAATAACTTCTCAGACGCAAATAAGCTTGGACAAGATCCTATTGGACGTGCGCAAATGAAATGGGAAATGCGCTACAAAATCATAGAAGGCATTGCACGAGGCCTTGTGTACCTTCATGAGGAATCTCAACAACGAATTATACATCGTGATCTCAAAGCAAGCAATATTCTCTTAAATGCCGAAATGAATCCAAAAATATCAGATTTTGGCATGGCACGACTGTTTGTTATGGATCAAACTCAAGCCAATACAAATAGAATTGTGGGAACCCTGGCAGGTTATGAAGTGGTTTATTATATACCTGTTTTTGGATTTTTATTAACCATAGCATCTAGATTCAAATGGGAGAGGAGAAATGCTATAGCATTGGAATCTGGTTGGGCACATGGACAAAGACAATTGGATTGCAACTTGCAAGTTGACATCTCACTAAAGATGCTAAGTGCTGGAAAACACGTTCTTCAAGGTACAAGTGAGTTGGAAACTGCATTATATAAATACAAATCTATTTCTGCTTATGTTCCTGGCCACTTAATTTGGGCTGTGGCTGAAAATTATCGATTTGAACTTGGTTTTGTGGAGTGCAAGAAATTAATTGCTGAGATTGGGAAAATGATGAGCGTCCAAGTTATTGTTGAAGGATCAATGAACAGTTCAAACCCTTACTTCTCAAGCTCTTGGAGATGCAATTTCAATGGAGGTTTCATTCTTGATATGGGTGTGCATTACATAGCAGGGTTGAGGATGTTTATGTTTGGAGGGAAGGAAGGCAGCATCCAGGACCTATGA 1032 0.3905 MAAFSLLKIRNFVFAGKNKTSQTVIAIVVPIAAFVVLLNLIWIYVRLRKRRKHLQSELEADKETELADSIQFDFDTIKVATNNFSDANKLGQDPIGRAQMKWEMRYKIIEGIARGLVYLHEESQQRIIHRDLKASNILLNAEMNPKISDFGMARLFVMDQTQANTNRIVGTLAGYEVVYYIPVFGFLLTIASRFKWERRNAIALESGWAHGQRQLDCNLQVDISLKMLSAGKHVLQGTSELETALYKYKSISAYVPGHLIWAVAENYRFELGFVECKKLIAEIGKMMSVQVIVEGSMNSSNPYFSSSWRCNFNGGFILDMGVHYIAGLRMFMFGGKEGSIQDL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0529 343 ProSiteProfiles Protein kinase domain profile. 1 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g0529 343 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 273 332 - -
Glsi01g0529 343 SUPERFAMILY Protein kinase-like (PK-like) 97 172 IPR011009 -
Glsi01g0529 343 FunFam Os07g0541700 protein 86 171 - -
Glsi01g0529 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Glsi01g0529 343 Coils Coil 44 64 - -
Glsi01g0529 343 SMART serkin_6 7 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g0529 343 Gene3D Transferase(Phosphotransferase) domain 1 86 179 - -
Glsi01g0529 343 Gene3D Dihydrodipicolinate Reductase; domain 2 265 341 - -
Glsi01g0529 343 Pfam Protein kinase domain 105 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi01g0529 343 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0529 Glsi-ChrGlsi01 5778834 5788314 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0529 37 180 Receptor kinase-like Gene Family AT4G23280 43.158 8.46e-36 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi01g0529 Pkinase 1.3e-14 CL0016