Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0523 ATGTGCACACTTACAGGCGCAGAGGTTGGTCTCATCGTCTTCTCCCCTGGCGACAAAGCCTACTCCTTTGGCCACCCAACTATTGGTTCTGTGGTTGAGCGCTACCTTACTGGATCCCCACCTCCACAGATCACCTCTACCAAGCAAATTCTCGAGGCTTTTCGCGATGTTAGAGTCCGGGAGCTCAATTCGGAGCTCACTGAGGTCATGAACCAGCTTGAAATCGAGAAGAAGCGTTCAGAGGAACTGAACAACCAGCGAAAGGCAATGCAAGCTATGTATTGGTGGGCTGCCCCACCTGATGATTTTACAAGGCCAGAACTGGAGAAGATGAAGGAGGTCTTGGAGGACCTGAAGAAGAACCTCACTCGCGAAACTGATCGCCGCCTCCTCAATATTCAGAGTGCTTCCAACCCAGTTCAGTTCCATGCAGGCAGCTCCTCCTCCCACCCGGTGCCATCCCCAACTCAAGTATTTCCGCCGCTGCAGATGCTGCCACCACCGTCAATGAACCAAAGCCCTGCGGTGCAGCAGTATCTGATGTTTGATGGAGACATGAAGCCACTGCCACCCCATGGGTTCAACAACATGGGGGGTTATGGACCAAGATCAGGCTTCTACTGA 624 0.5288 MCTLTGAEVGLIVFSPGDKAYSFGHPTIGSVVERYLTGSPPPQITSTKQILEAFRDVRVRELNSELTEVMNQLEIEKKRSEELNNQRKAMQAMYWWAAPPDDFTRPELEKMKEVLEDLKKNLTRETDRRLLNIQSASNPVQFHAGSSSSHPVPSPTQVFPPLQMLPPPSMNQSPAVQQYLMFDGDMKPLPPHGFNNMGGYGPRSGFY 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0523 207 MobiDBLite consensus disorder prediction 154 168 - -
Glsi01g0523 207 MobiDBLite consensus disorder prediction 140 172 - -
Glsi01g0523 207 Coils Coil 105 128 - -
Glsi01g0523 207 PANTHER MADS BOX PROTEIN 2 125 - -
Glsi01g0523 207 Gene3D - 1 47 IPR036879 GO:0003677|GO:0046983
Glsi01g0523 207 SUPERFAMILY SRF-like 1 53 IPR036879 GO:0003677|GO:0046983
Glsi01g0523 207 Coils Coil 59 93 - -
Glsi01g0523 207 Gene3D - 48 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0523 Glsi-ChrGlsi01 5645151 5645774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0523 1 206 Type I MADS-box Gene Family AT5G60440 35.545 7.22e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Glsi01g0523 SRF-TF 6.1e-05 No_clan