Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0522 ATGCAGACTCTTGAGACTCTTAGCATTAATTCCAGAGTTCGTAAGCTCAACGGAGAGCTCAATGAGCTCATGAATCAGCTCGAAGCCGAGAAGAAACGTGCCGAGGAGCTGAAAAAACAGCGAAAAGAGATCGAGGCTAAATTCCCGTGGGCTGCTCAAAATAAAGATTTGTCAAGGCCAGAGTTAGAGAAGAAAAAGGCGTACCTAGAGGAACTAAAGAAGAACCTCACTCGCCAAATTGATCAGGGCCTCCTCATTCAAAGTGCTTCCAACCTATCTCAATTCTATGCAGGGAGCTCCTCCTCCGACCCGTTGCCATCACCAGTTCAGGCAGCACCACCTCAGGGTTTGAATTTTCAGCGTCTTGGTGTTCGTGGTTCTGGTCATGTTTCTTCTTCTCTTGTCATTTCCTTTATGTTAAATTGA 426 0.4601 MQTLETLSINSRVRKLNGELNELMNQLEAEKKRAEELKKQRKEIEAKFPWAAQNKDLSRPELEKKKAYLEELKKNLTRQIDQGLLIQSASNLSQFYAGSSSSDPLPSPVQAAPPQGLNFQRLGVRGSGHVSSSLVISFMLN 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0522 141 Coils Coil 10 47 - -
Glsi01g0522 141 Coils Coil 59 82 - -
Glsi01g0522 141 Gene3D - 2 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0522 Glsi-ChrGlsi01 5641693 5642230 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0522 1 103 Type I MADS-box Gene Family AT5G60440 39.423 9.69e-10 53.5