Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0507 ATGTCTCAGTCGTCGGAGTTGTCCGCCGCCGGAAGCTTGTTCTGCTGCGAGGACGCCGCTGAAGTGGTGTCCTCCGTTGCGGACACGTCGATCTCCGACCATCCCTCGTCATCATCGTCTCTACCACTCTATACGCCGCCGGCCGATGAGACAATCATCGGCGGACTCATCGACGTCGAGACCCATCACATGCCCGACCCGGATTATCCACAACGCTGCCATGGCCGTTTCATCGACGTCACCGCTCGCCAACACTCCATCAACTGGATCTTGAAGCGACCAACTGGGTGGCCGTTTCAGCTGCTATCAGTGGCTTGTTTGTCTTTGGCGGCGAAAATGGAGGAGCCCCATGTCCCTCACTTGCTGGACCTTCAATTGTTCGAACCCAGATTCGTGTTCGAACCCAAGACGATCCAGAGAATGGAGCTCTGGGTCATGACCAGTCTCAAGTGGAGATTACGCTCTGTAACGCCCTTCGACTACCTCCATTATTTTATCTCCAAGCTCCCTTCTTCCTCCACCCCAGAACCCGAACCCGAACTCGATCTCATGAACCGGGTCTTCTCTGCTGCCTCCGACCTCATTATTTGCACCACTCATGTGGTTGAGTTCCTGAGATATGCACCGTCGACCATCGCCGCCGCCGCCGTGCTCTGTTCAGCTGGCCAACGCCACGATATCCACCACCAATCTCCGCCGTGTTTTCATGACAGAGTAAACAAAGAAATGGTGAGAAGCTGTCACCAACTAATGATGGAGTACGTGGTGGGCACGTGTCCGGGAACTCTCCATATAGGGCGTAGAGCGGAGGCTGCGCCTCTTTCAAGCCCCATCGGCGTGCTCGACGCCGCTACTTATAGGAGCTGCGACACCCGTTCCGAGAACCTGGGGTCAAGCAGGCAAGCCGAGGAGCCGTCCAAGAAGCGGCTGCGATCCTCTGCTGTGGATGTATAG 954 0.5639 MSQSSELSAAGSLFCCEDAAEVVSSVADTSISDHPSSSSSLPLYTPPADETIIGGLIDVETHHMPDPDYPQRCHGRFIDVTARQHSINWILKRPTGWPFQLLSVACLSLAAKMEEPHVPHLLDLQLFEPRFVFEPKTIQRMELWVMTSLKWRLRSVTPFDYLHYFISKLPSSSTPEPEPELDLMNRVFSAASDLIICTTHVVEFLRYAPSTIAAAAVLCSAGQRHDIHHQSPPCFHDRVNKEMVRSCHQLMMEYVVGTCPGTLHIGRRAEAAPLSSPIGVLDAATYRSCDTRSENLGSSRQAEEPSKKRLRSSAVDV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0507 317 MobiDBLite consensus disorder prediction 292 317 - -
Glsi01g0507 317 Gene3D - 97 154 - -
Glsi01g0507 317 MobiDBLite consensus disorder prediction 301 317 - -
Glsi01g0507 317 Gene3D - 155 247 - -
Glsi01g0507 317 FunFam D6-type cyclin 146 249 - -
Glsi01g0507 317 SUPERFAMILY Cyclin-like 43 153 IPR036915 -
Glsi01g0507 317 PANTHER CYCLINS 85 253 IPR039361 -
Glsi01g0507 317 CDD CYCLIN_AtCycD-like_rpt2 156 251 - -
Glsi01g0507 317 Pfam Cyclin, N-terminal domain 99 153 IPR006671 -
Glsi01g0507 317 SMART Cyclin_C_2 156 289 IPR004367 -
Glsi01g0507 317 Pfam Cyclin, C-terminal domain 156 255 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0507 Glsi-ChrGlsi01 5417901 5419435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0507 13 251 Core Cell Cycle Gene Families AT1G70210 36.996 2.51e-47 160