Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0492 ATGGATCAACAATCTCCCTCTGATCTACTCTTTACTGTGAGGAGAAGCCAACCAGAACTGGTAACTCCCGCTAAGCCCACTCCCCGAGAACTTAAGCTACTCTCTGACATTGATGACCAAGAATCTCTACGTTTCCAAATTGGACTGATTCAGATTTATCGTTACGAGCCTTCTATGGCTGGAAAGGACCCTGCTCAAGTTATTAGACATGCACTCGCTCAAACGTTGGTGTTTTACTACCCGTTCGCTGGTAGACTTAGGGAAGGTCGTGGCCGCAAACTTATGGTGGATTGTACTGCAGAGGGTGTCCTATTCATTGAAGCTGATGCAGATGTTACACTTGACCAATTTGGTGACACTCTTCAACCTCCATTCCCATGCTTCCATGAGCTCCTTTATAATGTTCCTGGCTCTGAAGGAATTATTCACTGTCCCCTCTTGCTTATACAGGTTACACGCCTCAAATGCGGTGGTTTTATTTTGGCCTTCCGTCTAAACCACACCATGTGTGACGGTCCTGGTTTGATTCAATTCATGAATGCCTTAGCCGAAATTGCCCGGGGTGCTATTGAACCTACCATTCCACCTCTGTGGTGTAGGGAGCTCTTAAATGCAAGGGATCCGCCCCGCATCACGTGCAAACATCGCGAATACGAACAAGTGCCTGATAGTGGAGGGACGGAAGAAGCAGACATAGCCCACGGCTCCTTCTTCATAGGACACAGCAAGATAGCGGCCATCCGTCGACAATTGGTACCTCATCGCCTTCGTCAATATTGCAGCACATTCGAGATCCTCACGGCATGTCTTTGGCGTTGCCGCACTATAGCATTGCAGCCAGAAGCAGAGGAGGAGGTTCGCTTGATGTGCATTTGCAACACACGTGGCCGCAAGTTTAACCCTCCATTAGTACCTGTTGGTTATTACGGCAATGCTTTCGTTTTCCCGGCCATTGTCACCACTGCGGGGAAGCTTTGCGGAAACCCATTGGAGTATGCCGTAGAGTTAGTGAAGAAAGTAAAGGCTGAGGCAACTGAGGAGTATGTGCGCTCTGTAACAGATCTGATGGTGATTCGCGGACGACCTCTCTTGACTACAGTAACGTCCTACCTTGTGTCGGATTTGTCCCATGCTAGGTTTAAAGATGTGGATTTTGGGTGGGGCAAGGCGGTTTATGGTGGAATAGCTGAGGGTGGAATTGGGGCTTTTCCTGGAGTAAGCTTTTTAGTTGCACATGAGAATGCGAAAGGAGAGGAAGGCATAGTAGTACCAATTTGCTTGCCACCCAAAGCTTTGAAGAGGTTTGAGAAAGCGTTAGATGACATGCTTAAGAACTACAGTATAATCAAGTCTTCTTTGTAG 1362 0.478 MDQQSPSDLLFTVRRSQPELVTPAKPTPRELKLLSDIDDQESLRFQIGLIQIYRYEPSMAGKDPAQVIRHALAQTLVFYYPFAGRLREGRGRKLMVDCTAEGVLFIEADADVTLDQFGDTLQPPFPCFHELLYNVPGSEGIIHCPLLLIQVTRLKCGGFILAFRLNHTMCDGPGLIQFMNALAEIARGAIEPTIPPLWCRELLNARDPPRITCKHREYEQVPDSGGTEEADIAHGSFFIGHSKIAAIRRQLVPHRLRQYCSTFEILTACLWRCRTIALQPEAEEEVRLMCICNTRGRKFNPPLVPVGYYGNAFVFPAIVTTAGKLCGNPLEYAVELVKKVKAEATEEYVRSVTDLMVIRGRPLLTTVTSYLVSDLSHARFKDVDFGWGKAVYGGIAEGGIGAFPGVSFLVAHENAKGEEGIVVPICLPPKALKRFEKALDDMLKNYSIIKSSL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0492 453 Gene3D - 220 441 IPR023213 -
Glsi01g0492 453 PANTHER ACYL TRANSFERASE 4 11 443 - -
Glsi01g0492 453 Gene3D - 12 219 IPR023213 -
Glsi01g0492 453 Pfam Transferase family 16 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0492 Glsi-ChrGlsi01 4825146 4826646 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0492 20 439 Monolignol Biosynthesis Gene Families AT5G48930 30.805 5.99e-51 176