Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0491 ATGGATCAACAATATCCCTCTGATCTAGGCTTTACTGTGAGGAGGAGCCTACCAGAATTGGTAGCTCCTGCTAAGCCCACTCCCCGAGAATTTAAGCTACTCTCCGACATTGATGACCAAGAATCTCTACGTTTTCAAATTCCAGTAATACAAATTTATCGTTACGAGCCTTCCATGGCTGGAAAGGACCCAGCTCAAGTTATTAGAAACGCAGTCGCTCAAACGCTAGTGTTTTACTACCCGTTAGCTGGTAGACTTAGGGAAGGCCCTGGTCGTAAACTTATAGTGGATTGTACTGCAGAGGGCGTCATGTTCATTGAAGCTGATGCAGATGTTACACTCGACCAATTTGGTGACGCTCTTCAACCTCCATTCCCATGCTTCCAAGAGCTCCTTTACAATGTTCCTGGCTCTGAAGGAATTGTTCACTGTCCCCTCTTGCTTTTACAGGTTACCCGCCTCAAATGTGGTGGTTTTATTTTGGGCCTTCGCCTAAACCACACCATGAGCGATGGTCCTGGTTTCATTCAATTCATGAATGCCTTAGCCGAAATTGCCCGGGGTGCTACTGAACCTGCCATTCCACCTCTCTGGCGTAGGGAGCTCCTAAATGCAAGGGATCCGCCCCGCATTACATGCACGCATCGTGAATACGAACAAGTGCCTGATAGTGAAGGGACCGAAGAAGCAGACATAACCCAAGGCGCCGTCTTCATAGCCCACAGCAAGATAGCAGCCATCCGTCGACAGTTGGTACCTCATCGCCTTCGTCAATATTGCAGCACATTTGAGATCCTGACGGCATGTCTCTGGCGTTGCCGCACTATAGCATTGCAGCTAGAAGCAGAGGAGGAGGTTCGCTTGATGTGCATCAGCAACACACGTGGCCGCAAGTTTAACCCTCCATTAGTACCTGTTGGTTATTACGGCAATGCCTTCGTTTTCCCCGCCATTGTCACCACTGTAGGGAAGCTTTGCGGAAACCCATTGGAGTATGCGGTAGAGTTAGTGAAGAAAGTAAAGGCTGAGATAACTGAGGAGTATGTGCATTCTGTAACAGATCTGATGGTGATTCGAGGACGACCTCTCTTGACTACAGTAAGGTCCTACGTTGTGTCAGATTTGTCCCTTGCGGGGTTTAGAGATGTGGATTTTGGGTGGGGCAAGGCAGTTTATGGTGGACCAGCTGAGGCTGGGATTGGGGTTTTTCCTGGACTAAGCTTTTTCATTCCACATAAGAATGCAAAGGGAGAGGAAGGTATGGTAGTGCCAATTTGCTTGCCACCCAGAGCTTTGAAGAGGTTCGCGAAAGCGTTGGATGACATGCTTAAGAACCATAGTATTATGAGGTCTTCCTTGTAG 1362 0.4831 MDQQYPSDLGFTVRRSLPELVAPAKPTPREFKLLSDIDDQESLRFQIPVIQIYRYEPSMAGKDPAQVIRNAVAQTLVFYYPLAGRLREGPGRKLIVDCTAEGVMFIEADADVTLDQFGDALQPPFPCFQELLYNVPGSEGIVHCPLLLLQVTRLKCGGFILGLRLNHTMSDGPGFIQFMNALAEIARGATEPAIPPLWRRELLNARDPPRITCTHREYEQVPDSEGTEEADITQGAVFIAHSKIAAIRRQLVPHRLRQYCSTFEILTACLWRCRTIALQLEAEEEVRLMCISNTRGRKFNPPLVPVGYYGNAFVFPAIVTTVGKLCGNPLEYAVELVKKVKAEITEEYVHSVTDLMVIRGRPLLTTVRSYVVSDLSLAGFRDVDFGWGKAVYGGPAEAGIGVFPGLSFFIPHKNAKGEEGMVVPICLPPRALKRFAKALDDMLKNHSIMRSSL 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0491 453 Gene3D - 12 220 IPR023213 -
Glsi01g0491 453 Pfam Transferase family 18 439 - -
Glsi01g0491 453 PANTHER ACYL TRANSFERASE 4 11 443 - -
Glsi01g0491 453 Gene3D - 222 441 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0491 Glsi-ChrGlsi01 4804847 4806346 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0491 20 439 Monolignol Biosynthesis Gene Families AT5G48930 30.485 3.84e-54 185