Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0489 ATGGATCAACAATCTCACTCTGATCTAGTCTTTACAGTGAGGAGGAGCCAACCAGAACTGGTAGCTCCCTCTAAGTCCACTCCCCGAGAACTTAAACTACTCTCAGACATTGATGACCAAGAAACGCTACGTTTCCAAATTCAAGCGATACAGATTTACGGTTATGAGCCTTCCATGGCTGGGAAGGACCCTGCTGAAGTTATTAGAAACGCACTTGCTCAAACGCTAGTGTTTTACTACCCGTTCGCTGGTAGACTTAGGGAAGGCCCTGGCCGCAAACTTATGGTGGATTGTACTGCAGAGAGCGTCATGTTCATTGAAGCTGATGCAGATGTTACACTCGACCAATTTGGTGACACTCTTCAACCTCCATTCCCATGCTTCCAAGAGCTCCTTTACAATGTTCCTGGCTCTGAAGGAATTGTTCACTGTCCCCTCTTGCTTATACAGGTTACCCGCCTCAAATGCGGTGGTGTTATTTTTACCCTCCGCCTAAACCACACCATGAGCGATGGTCCTGGTTTCGGTCAATTCCTGAATGCCTTAGCCGAAATTGCCCGCGGTGCTTCTGAACCTACCATTCCACCTCTCTGGCGTAGGGAGATCCTAAATGCAAGGGATCCGCCCCGCATTACATGCACACATCGCGAATACGAACAAGTGCCTGATAGTGAAGGGACCGAAGAAGCAGACATAGCCCACGGCTCCTTCTTCATAGCACACAGCAAGATAGCAGCCATCCGTCGACAATTGGTACATCATCGCCTTCCTCAATATTGCAGCACATTTGAGATCCTCGCGGCATGTCTCTGGCGTTGCCGCACTATAGCATTGCAGCTAGAAGCAGAGGAGGAGGTTCGCTTAATGTGCGTCAGCAACACACGTGGCCGCAAGTTTAACCCTCCATTAGTACCTGTTGGTTATTACGGCAATGCCTTCGTTTTCCCGGCCATTGTCACCACTGCGGGGAAGCTTTGCGGAAGCCCATTTGAGTATGCCGTAGAGTTAGTGAAGAAAGTAAAGGCTGAGGTAACTCTGGAGTACGTGCACTCTGTAGCAGATCTGATGGTGATTCGAGGACGACCTCTCTTGACTGCAGTAAGGTCCTACCTTGTGTCGGATTTGTCACGTGGTGGGATGAAAGATGTGGATTTTGGGTGGGGTAAGGCCGTTTATGGTGGAGTAGCAGAGGGTGGGATTGGGGCTTTTCCTGGAGCAAGCTTTTTAATTGCACATGAGAATGCAAAAGGAGAGGAAGGCATATTAGTAACAATTTGCTTGGCGCCCGAAGCTTTGAAGAGGTTCGAAGAAGCGTTGGATGACATGCTTGGATGA 1335 0.4921 MDQQSHSDLVFTVRRSQPELVAPSKSTPRELKLLSDIDDQETLRFQIQAIQIYGYEPSMAGKDPAEVIRNALAQTLVFYYPFAGRLREGPGRKLMVDCTAESVMFIEADADVTLDQFGDTLQPPFPCFQELLYNVPGSEGIVHCPLLLIQVTRLKCGGVIFTLRLNHTMSDGPGFGQFLNALAEIARGASEPTIPPLWRREILNARDPPRITCTHREYEQVPDSEGTEEADIAHGSFFIAHSKIAAIRRQLVHHRLPQYCSTFEILAACLWRCRTIALQLEAEEEVRLMCVSNTRGRKFNPPLVPVGYYGNAFVFPAIVTTAGKLCGSPFEYAVELVKKVKAEVTLEYVHSVADLMVIRGRPLLTAVRSYLVSDLSRGGMKDVDFGWGKAVYGGVAEGGIGAFPGASFLIAHENAKGEEGILVTICLAPEALKRFEEALDDMLG 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0489 444 Gene3D - 219 441 IPR023213 -
Glsi01g0489 444 PANTHER ACYL TRANSFERASE 4 11 442 - -
Glsi01g0489 444 Gene3D - 12 218 IPR023213 -
Glsi01g0489 444 Pfam Transferase family 16 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0489 Glsi-ChrGlsi01 4768567 4770025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0489 20 439 Monolignol Biosynthesis Gene Families AT5G48930 30.206 1.04e-49 173