Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0488 ATGGATCAACAAACTCCCTCTGATCTAGTCTTTACTGTAAGGAGGAGCCAACCAGAACTGGTAGCTCCCTCTAAGTCCACTCCCCGAGAATTTAAGCTACTCTCCGACATTGATGATCAAGAATCTCTACGTTTCCAAATTCCAGTTATACAAATTTATCGTTTCAAGCCTTCCATGGCTGGAAAGGACCCTGCTCAAGTTATTAGAAATGCACTCGCTCAAGCCCTAGTGTTTTACTACCCATTCGCGGGTAGACTTAGGGAAGGCCCTGGCCGCAAACTTATGGTGGATTGTACTGCAGAGGGCGTCCTGTTCATTGAGGCTGATGCAGATGTTACACTCGACCAATTTGGTGACACTCTTCAACCTCCATTCCCATGCTTCCAGGAACTCCTTTATAACGTTCCTGGTTCTGAAGGAATTATTCATTGTCCCCTCTTGCTTATACAGGTTACACGCCTCAAATGCGGTGGTTTTGTTTTGGGCCTCCGTCTAAACCATACCATGAGTGATGGTCCTGGTCTTGCTCAATTCTTAAATGCCTTGGCCGAAATTTCTCGGGGTGCTACTAAACCTACCATTCCACCTCTATGGCGTAGGGAGCTCCTAAATGCAAGGGATCCGCCCCGCATTACATGCACACATCGCGAATATGAACAAGTGCCTGATAGTGAAGGGACCGAGGAAGCAGACATAGCCCACCACTCCTTCTTCATAGCTCACAACAAGATAGCAGCCATCCGCCGACAGTTGGTATCCAATCCCTTTTGTCAATATTGCAGCACTTTTGAGATCCTCGCGGCATGTCTTTGGCGTTGCCGCACTATAGCATTGCAGTTAGAAGAAGAGGAGGAGGTTCGCTTGATGTGTAACATTAACACACGTGGTCGCAAGTTTAGCCCTCCTTTGGTACCTGTTGGTTATTACGGCAATGCCTTTGTTTTCCCGGCCATCGTCACCACTGCAGGGAAGCTTTGCGGAAACTCATTTCAGTATGCCATAGAGTTGGTGAAGAAAGTAAAGGCTGAGGTAACTGAGGAGTACATGCACTCTGTAGCAGATCTAATGGTGATTAAGGGACGACCTCTCTTGACTACAGTAAGGTCTTACCTTGTGTCGGATTTGTCACATGCTGGGCTCACAGATGTGGACTTTGGATGGGGCAAAGCAGTTTATGGTGGACCAGCAAAGGGTGGAATTAGGGCTTTTCCTGGAGTAAGCTTTTTCATTCCACATAAGAATGCAAAAGGAGAGGAAGGTACAGTAGTACCAATTTGCTTGCCACCCAAAGCTTTGAAGAGGTTCGCGAAAGCCTTGGATGATATCCTTAATAACCTTGTGTCTTACAAGTTACGAGGATATCGAAAGGAAGAACTTAAGCCCCATCGGAGACAGGTATCAAACTAG 1407 0.4677 MDQQTPSDLVFTVRRSQPELVAPSKSTPREFKLLSDIDDQESLRFQIPVIQIYRFKPSMAGKDPAQVIRNALAQALVFYYPFAGRLREGPGRKLMVDCTAEGVLFIEADADVTLDQFGDTLQPPFPCFQELLYNVPGSEGIIHCPLLLIQVTRLKCGGFVLGLRLNHTMSDGPGLAQFLNALAEISRGATKPTIPPLWRRELLNARDPPRITCTHREYEQVPDSEGTEEADIAHHSFFIAHNKIAAIRRQLVSNPFCQYCSTFEILAACLWRCRTIALQLEEEEEVRLMCNINTRGRKFSPPLVPVGYYGNAFVFPAIVTTAGKLCGNSFQYAIELVKKVKAEVTEEYMHSVADLMVIKGRPLLTTVRSYLVSDLSHAGLTDVDFGWGKAVYGGPAKGGIRAFPGVSFFIPHKNAKGEEGTVVPICLPPKALKRFAKALDDILNNLVSYKLRGYRKEELKPHRRQVSN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0488 468 Gene3D - 227 441 IPR023213 -
Glsi01g0488 468 Pfam Transferase family 16 438 - -
Glsi01g0488 468 Gene3D - 12 220 IPR023213 -
Glsi01g0488 468 PANTHER ACYL TRANSFERASE 4 11 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0488 Glsi-ChrGlsi01 4747398 4749253 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0488 20 442 Monolignol Biosynthesis Gene Families AT5G48930 31.808 1.54e-55 189