Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0486 ATGGATCAACAATCTCCCTCTGATCTAGCCTTTACTGTGAGGAAGAGTCAACCAGAAATGGTAGCTCCCGCTAAGCTCACTCCCCGAGAATTTAAGCTACTTTCTGACATTGATGATCAAGAGTCTCTACGTTTCCAAGTTCGACTGATTCAAATTTATCGTTACGAACCTTCCATGGCTGGGAAGGACCCTGCTCAAATTATTAGAAAGGCACTCACTCAAACGCTAGTGTTTTACTACCCATTTGCAGGTAGACTTAGGGAAGGCCCTGGCCGCAAACTTGTGGTAGATTGTACTGCAGAGGGCGTCATGTTCATTGAGGCTGATGCAGATGTTACACTCGACCAATTTGGTGACACTCTTCAACCTCCATTCCCATGCCTCCAAGAGCTCCTTTATAATGTTCCTGGCTCAGAAGGAATTATCCACTGTCCCCTGTTGCTTATACAGGTTACACGCCTCAAATGCGGTGGTTTTATTTTGGGCCTCCGCCTAAACCACACCATAAGCGATGCTCCTGGTTTGGTTCAATTTATGAATGCCTTAGCCGAAATTGCCCGCGGTGCTACTGAACCTACCATTCCACCTTTGTGGTGTAAAGAGCTCCTGAAAGCAAGGGATCCGCCCCGTATTACATGCACACATCGCGAATACGAGAATGTGCCTAATAGTGAACTGCTCCTTCTTCATTGCACACAGCAAGATAGCGGCCATCCGTCGACAGTTACATTGCAACTAGAAGCAGAGGAGGAGGTTCGCTTTATGTGCATCAGCAACACACGTGGCCGCAAGTTTAACCCTCCATTAGTACCTGTTGGTTATTACGGCAATGCCTTCGTTTTCCCAGCTATTGTCACCACTGCAGGGAAGCTTTGCGGAAACCCATTTAGGTATGCCCTCGATTTAGTGAAGAAAGTAAAGGCCGAGGTAACTGAGGAGTACGTGTACTCTGTAGCAGATCTGATGGTGATTCGGGGACGACCTCAATTCACCACGATAAGGTCCTACATTGTGTCGGATTTGTCACGTGCTGGGTTCACAGACGTGGATTTTGGGTGGGGCAAGGCAGTTTATGGTGGACCAGCGGAGGGTGGTATTGGAGCTTTTCCTGGAGTAAGCCCTTTCATTCCACATAAGAATGCAAAAGGAGAAGAAGGCATAGTAATACCAATTTGCTTGCCCCCTAAAGCTTTAAAGAGGTTCACGAAAGCGTTGGGTGACATGTTTAAGAACCACAGTATTATCAAGTCTTCCGTGTAG 1260 0.4714 MDQQSPSDLAFTVRKSQPEMVAPAKLTPREFKLLSDIDDQESLRFQVRLIQIYRYEPSMAGKDPAQIIRKALTQTLVFYYPFAGRLREGPGRKLVVDCTAEGVMFIEADADVTLDQFGDTLQPPFPCLQELLYNVPGSEGIIHCPLLLIQVTRLKCGGFILGLRLNHTISDAPGLVQFMNALAEIARGATEPTIPPLWCKELLKARDPPRITCTHREYENVPNSELLLLHCTQQDSGHPSTVTLQLEAEEEVRFMCISNTRGRKFNPPLVPVGYYGNAFVFPAIVTTAGKLCGNPFRYALDLVKKVKAEVTEEYVYSVADLMVIRGRPQFTTIRSYIVSDLSRAGFTDVDFGWGKAVYGGPAEGGIGAFPGVSPFIPHKNAKGEEGIVIPICLPPKALKRFTKALGDMFKNHSIIKSSV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0486 419 Gene3D - 12 220 IPR023213 -
Glsi01g0486 419 Gene3D - 230 407 IPR023213 -
Glsi01g0486 419 PANTHER ACYL TRANSFERASE 4 248 409 - -
Glsi01g0486 419 Pfam Transferase family 247 404 - -
Glsi01g0486 419 Pfam Transferase family 13 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0486 Glsi-ChrGlsi01 4718967 4720443 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0486 9 405 Monolignol Biosynthesis Gene Families AT5G48930 28.859 9.25e-44 156