Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi01g0477 | ATGTGGAAGCGGCTGAACAACCGAAGACATTTGGACGATAGGGCACTATCTGAGTTTGTGATGGCTTTGGAGGCTCTGAATTCTCCTACCATAACTCCCTATCAAGACGACGACGTTGACCTTCACTCCTTCGAGGCTTGGCCCAAGACGAATAAGCGCTCTAAACGGCAACGTCTTGATAACCACCACCATCCGACGGAAGAAGAGTATCTCGCTCTCTGCCTCATCATGCTAGCACACGGTGGGAACGACAACACCTCCCGTACTGAATCATCGCCAGTGTCGCGACAACCGCCAACAACATCACCGTCTCCTCCGATGAAGCCGTCTCACAGGTGTACTGTCTGTAACAAATCCTTTTCCTCTTACCAAGCACTCGGTGGCCACAAGGCCAGCCACCGCAAGTCCGCATCTGAATCCGCCGCCGCCGGCGGTGACAACTCCTCGGCCTCCAACTCCGCCACAACCACCGCCAGTGGCAAGATGCACCAGTGTTCCATCTGTCACAAGACTTTTCCCACCGGTCAAGCTCTCGGCGGCCACAAGCGCTGCCACTACGACGGCGGCAACAGCAGCGGCGTCATAACCTCCTCTGAGGGCGCCGGCACATCCAGCCACAGCCACAGCCACAGCCACCGTGGGTTTGACTTGAACCTCCCAGCACCCTTGACGGACTTTTTGGCTGGGGGATTCGGAGGCGCCGCCGTGAAGATTACGAAAAGTGGGGAACAAGAGGTGGAAAGCCCTCTGCCGGTATCCGCCAAGAAGGCGCGTTTGTTTATGGGGGAAGAAGACGGTGGGCCTGCGTCAGAGAATTGA | 819 | 0.569 | MWKRLNNRRHLDDRALSEFVMALEALNSPTITPYQDDDVDLHSFEAWPKTNKRSKRQRLDNHHHPTEEEYLALCLIMLAHGGNDNTSRTESSPVSRQPPTTSPSPPMKPSHRCTVCNKSFSSYQALGGHKASHRKSASESAAAGGDNSSASNSATTTASGKMHQCSICHKTFPTGQALGGHKRCHYDGGNSSGVITSSEGAGTSSHSHSHSHRGFDLNLPAPLTDFLAGGFGGAAVKITKSGEQEVESPLPVSAKKARLFMGEEDGGPASEN | 272 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi01g0477 | 272 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 165 | 185 | IPR013087 | - | |
Glsi01g0477 | 272 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED | 52 | 221 | IPR044653 | GO:0003700 | |
Glsi01g0477 | 272 | FunFam | Zinc finger protein ZAT10 | 108 | 185 | - | - | |
Glsi01g0477 | 272 | MobiDBLite | consensus disorder prediction | 127 | 156 | - | - | |
Glsi01g0477 | 272 | SMART | c2h2final6 | 111 | 133 | IPR013087 | - | |
Glsi01g0477 | 272 | SMART | c2h2final6 | 163 | 185 | IPR013087 | - | |
Glsi01g0477 | 272 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 111 | 138 | IPR013087 | - | |
Glsi01g0477 | 272 | MobiDBLite | consensus disorder prediction | 82 | 113 | - | - | |
Glsi01g0477 | 272 | MobiDBLite | consensus disorder prediction | 242 | 272 | - | - | |
Glsi01g0477 | 272 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 163 | 185 | IPR013087 | - | |
Glsi01g0477 | 272 | MobiDBLite | consensus disorder prediction | 82 | 97 | - | - | |
Glsi01g0477 | 272 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 113 | 133 | IPR013087 | - | |
Glsi01g0477 | 272 | MobiDBLite | consensus disorder prediction | 141 | 156 | - | - | |
Glsi01g0477 | 272 | Pfam | C2H2-type zinc finger | 111 | 135 | - | - | |
Glsi01g0477 | 272 | Pfam | C2H2-type zinc finger | 163 | 187 | - | - | |
Glsi01g0477 | 272 | SUPERFAMILY | beta-beta-alpha zinc fingers | 111 | 185 | IPR036236 | - | |
Glsi01g0477 | 272 | Gene3D | Classic Zinc Finger | 109 | 185 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi01g0477 | Glsi-ChrGlsi01 | 4574119 | 4576256 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi01g0477 | 21 | 259 | C2H2 Transcription Factor Family | AT1G27730 | 50.598 | 2.94e-60 | 189 |