Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0475 ATGAGCTGCAACGGTTGTCGTATCCTCCGAAAAGGTTGCAGGGAGGACTGCGTGCTCCGACATTGCCTTCAGTGGATAGACAGCCCACAAGCCCAAGCCCATGCCACCGTCTTCGTCTCCAAGTTCTTCGGCCGTGCCGGTCTCATGTCTTTCATTTCCTCCGTGCCCACCACCCAAAGATCTCATTTGTTTCAGTCACTATTATATGAAGCGGTGGGACGTTCCATAAATCCAGTAAATGGAGTAGTGGGGTTGCTCTGGACAGGGAACTGGCACCTCTGCCAGTTGGGGGTGGAGAGAGTGCTCCGAGGTGACGCGTTGTGCCCACTACCGCATGAGTTCTTCAGTGGTGGAGCAGCTTCTGTCCAGGTAACGGATGACGAGAGTTTTGGATCAGTTGTCGACAATTCAAATCAGCAAGACATGCGTAAGGGACATTCAAGGATGTTAAAGAGAAAGGTTTCGCATGAGGAGGGGAATTTTCAAGCCCATCATCAAAGCTTGCCGGAGAAAGCGGTAGTTTGTGGTGGAAGGCGTAACCATGAAAAGAAGCACCGGGCAGCGACACCGTCGGATGAATCGGAAACAACCACTTCGGGAAGTAGCCCACAGGGCAGTGCCGAAAGGAAGGTCCTTAGACTATTCTTCTGA 651 0.5207 MSCNGCRILRKGCREDCVLRHCLQWIDSPQAQAHATVFVSKFFGRAGLMSFISSVPTTQRSHLFQSLLYEAVGRSINPVNGVVGLLWTGNWHLCQLGVERVLRGDALCPLPHEFFSGGAASVQVTDDESFGSVVDNSNQQDMRKGHSRMLKRKVSHEEGNFQAHHQSLPEKAVVCGGRRNHEKKHRAATPSDESETTTSGSSPQGSAERKVLRLFF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0475 216 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Glsi01g0475 216 MobiDBLite consensus disorder prediction 192 206 - -
Glsi01g0475 216 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 214 - -
Glsi01g0475 216 MobiDBLite consensus disorder prediction 141 164 - -
Glsi01g0475 216 MobiDBLite consensus disorder prediction 133 210 - -
Glsi01g0475 216 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0475 Glsi-ChrGlsi01 4539798 4540698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0475 1 129 AS2 family AT3G49940 67.692 7.00e-62 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi01g0475 LOB 2.2e-24 No_clan