Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0461 ATGACGAGCGCTTCGGAGCTATTTTACAATAGGAGGCATCGTTTGGGACGAGCCGCAATCGATCAAGGGTTCGATTCCTTTCCCGGACGGGATCTTCACCTCGATTTCAATAACCACCGCCATCATCATCATCTGCATGATGTGCGTGGTGGTGATTCTCCCCGACGGTCCACGCCTGTGCGGCGGCTATGTCACCGTTGCTCCCATCCGGAGCGAGCACCAGCTAGATTTGACCTAAGAAGTAGCCGGACTTTTCCAGTTAGTGCCAATGCTCCAGAAAATTTAAACAGCGTAGGAAGCCCTAGAGTGACTGGGAATGACAGGCTACCAATAGCTGTGGTACATGCAAGGGCAAGACTCCTTGAGAGGCTGAGTGGGGCACCTCCCTCTGGAAACAGGCAAAATAGTAGAGGCTCACTGGAAATTGATGATATGAGGCGTATCCACTCTGGGGATGAACAGAGCGAGCTTTCAACTGGCAGTTTAGCTGTGGGCTTCCCACTAATTGACTTGACTTACCAAATGGAAAGGTCTCAGCTTTTGCAAGAAGTGAATAAAAAGCCACCTGGACTCACTCAGGAGGCTATAGACTGTTTGCATCTGGAAATCTTTAGCAGCATAGAAACAAGAAGGGAAGGAATGAAGTCTAGAGTACTGCAGGATTGTGGCATATGTTTGGAAACTTATCTGGATGGAGATGAACTGATAAACTTGCCATGTGGACATGGATTTCACTCTGCTTGTTTGGATCCTTGGGTTAGGAAATGCGGTGACTGTCCATACTGTCGAAAAGCTATAGTCATAAATAGTCACGTACAGCAAACACAGGCCGAGTAA 837 0.4815 MTSASELFYNRRHRLGRAAIDQGFDSFPGRDLHLDFNNHRHHHHLHDVRGGDSPRRSTPVRRLCHRCSHPERAPARFDLRSSRTFPVSANAPENLNSVGSPRVTGNDRLPIAVVHARARLLERLSGAPPSGNRQNSRGSLEIDDMRRIHSGDEQSELSTGSLAVGFPLIDLTYQMERSQLLQEVNKKPPGLTQEAIDCLHLEIFSSIETRREGMKSRVLQDCGICLETYLDGDELINLPCGHGFHSACLDPWVRKCGDCPYCRKAIVINSHVQQTQAE 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0461 278 MobiDBLite consensus disorder prediction 124 143 - -
Glsi01g0461 278 PANTHER SI:CH211-59O9.10 2 267 - -
Glsi01g0461 278 CDD RING-H2_PA-TM-RING 221 263 - -
Glsi01g0461 278 ProSiteProfiles Zinc finger RING-type profile. 222 263 IPR001841 -
Glsi01g0461 278 Pfam Ring finger domain 221 263 IPR001841 -
Glsi01g0461 278 SMART FANCL_C_2 218 269 - -
Glsi01g0461 278 SMART ring_2 222 262 IPR001841 -
Glsi01g0461 278 SUPERFAMILY RING/U-box 221 269 - -
Glsi01g0461 278 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 177 267 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0461 Glsi-ChrGlsi01 4064379 4068878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0461 1 267 C3H Transcription Factor Family AT1G49850 39.338 5.37e-40 137