Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0445 ATGGATGTCGACGAAAGCAGCTCGCCCAAAAGCCCTATGTGTGAATCGCCTGAACCTTCAACTTCAAGTGAACCCGATAACACTTTCACTATTGCTGTTTTCTTAAGGTTGTTTCTGAAATCTCCATTTCTTGTTATAGTATTGGGTCTCTGTGTATACTGTAATGCGAATAGAAGGCTATTTCCCGATTTAGGCACGGAGATAGTTCACAGCGATGATTTACCAAAACTGCGGGAAATTCTAGTGGATTGGCTAGTATTTGTTGCAGAGGCCTATGAGTTTACTTCTGGAACCCTTTATCTCACTGTATCTTACGTTGATAGATTCCTATCTTCTCGAGCTATCAATGGGAATAGGCTTCAACTTCTCGGTGTTTCTTCCATGCTTACTGCCTCGAAGCACGAAGAAGAGATCAGTAAACCTACTGTTCAAACCTTCTGCTCTATGACAGAAAACTCGTATACCCCCGAAGAGGATCCCCAGTTTTGCTTGGAAATGAGATACCTAGCTTATTATCTTTTGGAGCTAAGCTTGTTAGACTACAGGTGCCAGCAGTTTACACCATCAGTTGCAGCAGCGTCAGCTTTATTTCTTTCAAGGTTTACACGGAAACCACGGACAGTTCCTTGGATCTCAACGTTGCAATCTCGTACACAATTGTGGCCAAGTGACATACAGGACTGTGTTCTTGCCATGCGTGACTTGCAATTGAATGTCAAAGGAAGTCCATTAAGAGCAGTCCGACAGAAATACTCGCAAGCCAAGAGCCTTCTAAAGCAAATTACATTACTGGATGTGCTTGTTTTGAGGCTTGTTTGTGCCATTTATTTTGGAGGTTTATACGAAGGCAAGGAGGAAATCACACAACTGATAGCATATTACTATGTGCCTGCACGTTTTCACACTGTTTAA 912 0.4243 MDVDESSSPKSPMCESPEPSTSSEPDNTFTIAVFLRLFLKSPFLVIVLGLCVYCNANRRLFPDLGTEIVHSDDLPKLREILVDWLVFVAEAYEFTSGTLYLTVSYVDRFLSSRAINGNRLQLLGVSSMLTASKHEEEISKPTVQTFCSMTENSYTPEEDPQFCLEMRYLAYYLLELSLLDYRCQQFTPSVAAASALFLSRFTRKPRTVPWISTLQSRTQLWPSDIQDCVLAMRDLQLNVKGSPLRAVRQKYSQAKSLLKQITLLDVLVLRLVCAIYFGGLYEGKEEITQLIAYYYVPARFHTV 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0445 303 MobiDBLite consensus disorder prediction 9 25 - -
Glsi01g0445 303 Gene3D - 164 255 - -
Glsi01g0445 303 SMART cyclin_7 83 159 IPR013763 -
Glsi01g0445 303 SMART cyclin_7 161 234 IPR013763 -
Glsi01g0445 303 SUPERFAMILY Cyclin-like 60 158 IPR036915 -
Glsi01g0445 303 Pfam Cyclin, N-terminal domain 75 158 IPR006671 -
Glsi01g0445 303 SUPERFAMILY Cyclin-like 161 255 IPR036915 -
Glsi01g0445 303 Pfam Cyclin, C-terminal domain 161 255 IPR004367 -
Glsi01g0445 303 Gene3D - 75 158 - -
Glsi01g0445 303 PANTHER CYCLINS 72 253 IPR039361 -
Glsi01g0445 303 ProSitePatterns Cyclins signature. 78 109 IPR006671 -
Glsi01g0445 303 SMART Cyclin_C_2 141 267 IPR004367 -
Glsi01g0445 303 MobiDBLite consensus disorder prediction 1 25 - -
Glsi01g0445 303 Coils Coil 302 303 - -
Glsi01g0445 303 FunFam Cyclin A1 128 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0445 Glsi-ChrGlsi01 3884624 3887691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0445 57 255 Core Cell Cycle Gene Families AT1G47230 41.949 1.09e-51 172