LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi01g0445	ATGGATGTCGACGAAAGCAGCTCGCCCAAAAGCCCTATGTGTGAATCGCCTGAACCTTCAACTTCAAGTGAACCCGATAACACTTTCACTATTGCTGTTTTCTTAAGGTTGTTTCTGAAATCTCCATTTCTTGTTATAGTATTGGGTCTCTGTGTATACTGTAATGCGAATAGAAGGCTATTTCCCGATTTAGGCACGGAGATAGTTCACAGCGATGATTTACCAAAACTGCGGGAAATTCTAGTGGATTGGCTAGTATTTGTTGCAGAGGCCTATGAGTTTACTTCTGGAACCCTTTATCTCACTGTATCTTACGTTGATAGATTCCTATCTTCTCGAGCTATCAATGGGAATAGGCTTCAACTTCTCGGTGTTTCTTCCATGCTTACTGCCTCGAAGCACGAAGAAGAGATCAGTAAACCTACTGTTCAAACCTTCTGCTCTATGACAGAAAACTCGTATACCCCCGAAGAGGATCCCCAGTTTTGCTTGGAAATGAGATACCTAGCTTATTATCTTTTGGAGCTAAGCTTGTTAGACTACAGGTGCCAGCAGTTTACACCATCAGTTGCAGCAGCGTCAGCTTTATTTCTTTCAAGGTTTACACGGAAACCACGGACAGTTCCTTGGATCTCAACGTTGCAATCTCGTACACAATTGTGGCCAAGTGACATACAGGACTGTGTTCTTGCCATGCGTGACTTGCAATTGAATGTCAAAGGAAGTCCATTAAGAGCAGTCCGACAGAAATACTCGCAAGCCAAGAGCCTTCTAAAGCAAATTACATTACTGGATGTGCTTGTTTTGAGGCTTGTTTGTGCCATTTATTTTGGAGGTTTATACGAAGGCAAGGAGGAAATCACACAACTGATAGCATATTACTATGTGCCTGCACGTTTTCACACTGTTTAA	912	0.4243	MDVDESSSPKSPMCESPEPSTSSEPDNTFTIAVFLRLFLKSPFLVIVLGLCVYCNANRRLFPDLGTEIVHSDDLPKLREILVDWLVFVAEAYEFTSGTLYLTVSYVDRFLSSRAINGNRLQLLGVSSMLTASKHEEEISKPTVQTFCSMTENSYTPEEDPQFCLEMRYLAYYLLELSLLDYRCQQFTPSVAAASALFLSRFTRKPRTVPWISTLQSRTQLWPSDIQDCVLAMRDLQLNVKGSPLRAVRQKYSQAKSLLKQITLLDVLVLRLVCAIYFGGLYEGKEEITQLIAYYYVPARFHTV	303

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi01g0445	303	MobiDBLite	consensus disorder prediction	9	25	-	-
	Glsi01g0445	303	Gene3D	-	164	255	-	-
	Glsi01g0445	303	SMART	cyclin_7	83	159	IPR013763	-
	Glsi01g0445	303	SMART	cyclin_7	161	234	IPR013763	-
	Glsi01g0445	303	SUPERFAMILY	Cyclin-like	60	158	IPR036915	-
	Glsi01g0445	303	Pfam	Cyclin, N-terminal domain	75	158	IPR006671	-
	Glsi01g0445	303	SUPERFAMILY	Cyclin-like	161	255	IPR036915	-
	Glsi01g0445	303	Pfam	Cyclin, C-terminal domain	161	255	IPR004367	-
	Glsi01g0445	303	Gene3D	-	75	158	-	-
	Glsi01g0445	303	PANTHER	CYCLINS	72	253	IPR039361	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi01g0445	Glsi-ChrGlsi01	3884624	3887691	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi01g0445	57	255	Core Cell Cycle Gene Families	AT1G47230	41.949	1.09e-51	172

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