Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0442 ATGATCATCAAGGAAGATGAAAGTGTTGTAACAGGCAAGGAACAAGCAAGCGAAGGGATGAACAGAGACAGGAACAATGAAGGAAGTGAACATCACAAACCAGAAGAGTGGTTGAACTTGAGTTTAGGAGGAACTCAGCTCTCAACACCAGCAGCAGACCCTGAATCACCACAATCAATATCACCATCAACAACTACCAAAGTCTTCTCCTGCAACTTCTGCATGAGAAAGTTCTTTAGCTCGCAAGCACTGGGAGGGCACCAGAACGCCCACAAAAGAGAAAGAGGAGCAGCCAGAAGATATCAATCTCAGACGAAGATGATGCCAATGATGGGTTTGTCCATGAATCCTCCCATGCTTGGGTCACTTCGGGTCCAACCCCATTCACGGGTGCACAAGCCATGCAGAGGTGGAACAACACTGGCAGCAGCAAGCTTTCATGATGCCTATGGAGGGTTTGGAAATGGAATGGGATGGACGGCCTTCGTGCCTGAGGATCAAATGGATCGCGTTTGGCACGGCAGCTTTCGTTTGGATACACCACAACCCCAACCACCACAAGAGAAAAGCATTCGGAAACGCTTCAAGATTAGCAATTTAACACGCTGTCTACTATTACCCAGGTGTACACTGGTATGCCCCATGAGTCCACGCCATACAATGACCGGCATCATAAATCTACATAAGAAGCAACTGATGCCTTTAACAGCAATTGCAAAATATAACCATATTAATTCATTGTTTCTGTTCCCCACATACAATTCGAATCAGAAATGA 777 0.4607 MIIKEDESVVTGKEQASEGMNRDRNNEGSEHHKPEEWLNLSLGGTQLSTPAADPESPQSISPSTTTKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQTKMMPMMGLSMNPPMLGSLRVQPHSRVHKPCRGGTTLAAASFHDAYGGFGNGMGWTAFVPEDQMDRVWHGSFRLDTPQPQPPQEKSIRKRFKISNLTRCLLLPRCTLVCPMSPRHTMTGIINLHKKQLMPLTAIAKYNHINSLFLFPTYNSNQK 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0442 258 MobiDBLite consensus disorder prediction 1 37 - -
Glsi01g0442 258 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 189 - -
Glsi01g0442 258 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Glsi01g0442 258 SUPERFAMILY beta-beta-alpha zinc fingers 65 95 IPR036236 -
Glsi01g0442 258 MobiDBLite consensus disorder prediction 1 64 - -
Glsi01g0442 258 MobiDBLite consensus disorder prediction 41 64 - -
Glsi01g0442 258 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 96 IPR013087 -
Glsi01g0442 258 Gene3D Classic Zinc Finger 56 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0442 Glsi-ChrGlsi01 3858827 3860520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0442 51 180 C2H2 Transcription Factor Family AT1G66140 36.478 3.54e-18 79.7